POPTR_0003s08600 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0003s08600 T278239_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.788 0.894
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s08600.1 Myb 311 361
POPTR_0003s08600.2 Myb 290 340

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_03775 Schistosoma haematobium A_03775 N 0.000
csin105162 Clonorchis sinensis csin105162 N 0.000
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I 0.000
ECANG7_02014 Echinococcus canadensis ECANG7_02014 N 0.000
EmuJ_001054200 Echinococcus multilocularis EmuJ_001054200 N 0.000
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I 0.000
Gfo_R000026 Geospiza fortis Gfo_R000026 I 0.000
HDID_0000518601 Hymenolepis diminuta HDID_0000518601 N 0.000
HmN_000552800 Hymenolepis microstoma HmN_000552800 N 0.000
HNAJ_0001138301 Hymenolepis nana HNAJ_0001138301 N 0.000
SCUD_0002067401 Schistosoma curassoni SCUD_0002067401 N 0.000
Smp_085910 Schistosoma mansoni Smp_085910 N 0.000
SMU15026913 Schmidtea mediterranea SMU15026913 N 0.000
SROB_0000100701 Schistosoma rodhaini SROB_0000100701 N 0.000
T265_11677 Opisthorchis viverrini T265_11677 N 0.000
TASK_0000169301 Taenia asiatica TASK_0000169301 N 0.000
TsM_001161100 Taenia solium TsM_001161100 N 0.000
TTAC_0000253501 Hydatigera taeniaeformis TTAC_0000253501 N 0.000