POPTR_0005s14460 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0005s14460 T278283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.695 0.777
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s14460.1 Myb 8 55
POPTR_0005s14460.1 Myb 61 110

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_055710 Acremonium chrysogenum ACRE_055710 N 0.000