POPTR_0005s14490 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0005s14490 T278286_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.664 0.777
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s14490.1 Myb 9 56
POPTR_0005s14490.1 Myb 62 111

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000050701 Angiostrongylus cantonensis ACAC_0000050701 I 0.000
ACEP14857 Atta cephalotes ACEP14857 I 0.000
ACOC_0000924001 Angiostrongylus costaricensis ACOC_0000924001 I 0.000
ACYPI31510 Acyrthosiphon pisum ACYPI31510 I 0.000
AFAF020264 Anopheles farauti AFAF020264 I 0.000
AMAM003778 Anopheles maculatus AMAM003778 I 0.000
ANCCEY_04739 Ancylostoma ceylanicum ANCCEY_04739 I 0.000
ANCDUO_13968 Ancylostoma duodenale ANCDUO_13968 I 0.000
ASU_06642 Ascaris suum ASU_06642 I 0.000
BXY_0842900 Bursaphelenchus xylophilus BXY_0842900 I 0.000
CBG03854 Caenorhabditis briggsae CBG03854 I 0.000
CBN09920 Caenorhabditis brenneri CBN09920 I 0.000
CBN18838 Caenorhabditis brenneri CBN18838 I 0.000
CJA03417 Caenorhabditis japonica CJA03417 I 0.000
Cmyd_10014184 Chelonia mydas Cmyd_10014184 I 0.000
CRE08084 Caenorhabditis remanei CRE08084 I 0.000
DICVIV_01967 Dictyocaulus viviparus DICVIV_01967 I 0.000
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I 0.000
ENSBTAG00000003540 Bos taurus ENSBTAG00000003540 I 0.000
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I 0.000
ENSTGUG00000014218 Taeniopygia guttata ENSTGUG00000014218 I 0.000
EVEC_0001307101 Enterobius vermicularis EVEC_0001307101 I 0.000
Hba_17025 Heterorhabditis bacteriophora Hba_17025 I 0.000
HDID_0000016901 Hymenolepis diminuta HDID_0000016901 N 0.000
ISCW018799 Ixodes scapularis ISCW018799 I 0.000
L596_g1281 Steinernema carpocapsae L596_g1281 I 0.000
L889_g28085 Steinernema feltiae L889_g28085 I 0.000
L893_g1446 Steinernema glaseri L893_g1446 I 0.000
Minc05804 Meloidogyne incognita Minc05804 I 0.000
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.000
MYT1L Homo sapiens ENSG00000186487 I 0.000
NBR_0001165301 Nippostrongylus brasiliensis NBR_0001165301 I 0.000
nDi.2.2.2.g06992 Dirofilaria immitis nDi.2.2.2.g06992 I 0.000
NECAME_10938 Necator americanus NECAME_10938 I 0.000
nLs.2.1.2.g09672 Litomosoides sigmodontis nLs.2.1.2.g09672 I 0.000
Ocbimv22028295m.g Octopus bimaculoides Ocbimv22028295m.g I 0.000
OESDEN_24201 Oesophagostomum dentatum OESDEN_24201 I 0.000
PTRK_0001788400 Parastrongyloides trichosuri PTRK_0001788400 I 0.000
RSKR_0000214800 Rhabditophanes kr3021 RSKR_0000214800 I 0.000
Smp_168610 Schistosoma mansoni Smp_168610 N 0.000
SMU15028607 Schmidtea mediterranea SMU15028607 I 0.000
SMUV_0000666101 Syphacia muris SMUV_0000666101 I 0.000
SPAL_0000489100 Strongyloides papillosus SPAL_0000489100 I 0.000
SPAL_0000892700 Strongyloides papillosus SPAL_0000892700 I 0.000
SSTP_0000574400 Strongyloides stercoralis SSTP_0000574400 I 0.000
ST18 Homo sapiens ENSG00000147488 I 0.000
SVE_1935100 Strongyloides venezuelensis SVE_1935100 I 0.000
SVE_1952800 Strongyloides venezuelensis SVE_1952800 I 0.000
TELCIR_22038 Teladorsagia circumcincta TELCIR_22038 I 0.000
TELCIR_26151 Teladorsagia circumcincta TELCIR_26151 I 0.000
WBGene00238210 Onchocerca volvulus WBGene00238210 I 0.000
YQE_11977 Dendroctonus ponderosae YQE_11977 I 0.000
ztf-11 Caenorhabditis elegans WBGene00009939 D 0.000