POPTR_0017s05170 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0017s05170 T278503_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0017s05170.1 Myb 46 94

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30178.m000864 Ricinus communis 30178.m000864 N
AT3G07500 Arabidopsis thaliana AT3G07500 N
Bo5g141470 Brassica oleracea Bo5g141470 N
Bostr.22252s0282 Boechera stricta Bostr.22252s0282 N
Cagra.0133s0093 Capsella grandiflora Cagra.0133s0093 N
Carubv10014621m.g Capsella rubella Carubv10014621m.g N
Ciclev10016654m.g Citrus clementina Ciclev10016654m.g N
Cla015099 Citrullus lanatus Cla015099 N
Cucsa.388100 Cucumis sativus Cucsa.388100 N
Eucgr.K02085 Eucalyptus grandis Eucgr.K02085 N
evm.TU.supercontig_8.53 Carica papaya evm.TU.supercontig_8.53 N
gene17500-v1.0-hybrid Fragaria vesca gene17500-v1.0-hybrid N
Gorai.N002600 Gossypium raimondii Gorai.N002600 N
MDP0000123745 Malus domestica MDP0000123745 N
MDP0000156730 Malus domestica MDP0000156730 N
MDP0000243502 Malus domestica MDP0000243502 N
MDP0000348552 Malus domestica MDP0000348552 N
mgf009623m Mimulus guttatus mgf009623m N
orange1.1g028717m.g Citrus sinensis orange1.1g028717m.g N
POPTR_0014s17500 Populus trichocarpa POPTR_0014s17500 N
PRUPE_ppa011264mg Prunus persica PRUPE_ppa011264mg N
scaffold_300886.1 Arabidopsis lyrata scaffold_300886.1 N
TCM_002647 Theobroma cacao TCM_002647 N
VIT_00s0174g00120 Vitis vinifera VIT_00s0174g00120 N
VIT_00s0269g00010 Vitis vinifera VIT_00s0269g00010 N