CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb10g005020
(
Sorghum bicolor
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Sb10g005020
T279325_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8RUX5_MAIZE
M11060_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MRP1_Q2
0.699
0.830
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb10g005020.1
Myb
132
179
RRFWTTDEHRNFLYGLRAFGRSDWKNISKHFVTTRTPVQISSHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Sorghum bicolor
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA021814
Oryza indica
BGIOSGA021814
N
0.702
F775_03070
Aegilops tauschii
F775_03070
I
0.684
F775_23301
Aegilops tauschii
F775_23301
N
0.680
F775_23426
Aegilops tauschii
F775_23426
N
0.680
GRMZM2G030403
Zea mays
GRMZM2G030403
I
0.705
GRMZM2G111306
Zea mays
GRMZM2G111306
I
0.699
GRMZM2G402156
Zea mays
GRMZM2G402156
N
0.834
LPERR06G04400
Leersia perrieri
LPERR06G04400
N
0.674
OPUNC06G04640
Oryza punctata
OPUNC06G04640
I
0.700
Pavir.Ca01208
Panicum virgatum
Pavir.Ca01208
N
0.670
Pavir.J00203
Panicum virgatum
Pavir.J00203
N
0.670
Q8RUX5_MAIZE
Zea mays
Q8RUX5_MAIZE
D
0.699
Sb09g003290
Sorghum bicolor
Sb09g003290
N
0.693
Sb09g003300
Sorghum bicolor
Sb09g003300
N
0.693
Sb09g003390
Sorghum bicolor
Sb09g003390
I
0.699
Sb10g006570
Sorghum bicolor
Sb10g006570
I
0.691
TRIUR3_31433
Triticum urartu
TRIUR3_31433
N
0.680
TRIUR3_33433
Triticum urartu
TRIUR3_33433
N
0.680