ATMYBR1 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 scaffold_803378.1 T279424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.909 1.000
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.909 1.000
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.909 1.000
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.833 0.903
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.833 0.903
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.833 0.903
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.833 0.903
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.833 0.903
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.798 0.849
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.798 0.839
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.798 0.839
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.785 0.860
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.684 0.785
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.679 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_803378.1 Myb 6 52
scaffold_803378.1 Myb 58 103

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

324 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL014670 Aedes aegypti AAEL014670 I 0.000
Aan_R006597 Calypte anna Aan_R006597 N 0.000
ACHR008952 Anopheles christyi ACHR008952 I 0.000
AEPI008594 Anopheles epiroticus AEPI008594 I 0.000
Afo_R014607 Aptenodytes forsteri Afo_R014607 N 0.000
AGAP000512 Anopheles gambiae AGAP000512 I 0.000
Alligator_sinensis_CCG011289.1 Alligator sinensis Alligator_sinensis_CCG011289.1 I 0.000
Alligator_sinensis_CCG020461.1 Alligator sinensis Alligator_sinensis_CCG020461.1 I 0.000
Aqu1.216869 Amphimedon queenslandica Aqu1.216869 I 0.000
BGIBMGA001129 Bombyx mori BGIBMGA001129 I 0.000
CBG02541 Caenorhabditis briggsae CBG02541 I 0.000
Cmyd_10009267 Chelonia mydas Cmyd_10009267 I 0.000
CPIJ013490 Culex quinquefasciatus CPIJ013490 I 0.000
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I 0.000
D917_06432 Trichinella nativa D917_06432 I 0.000
D918_02241 Trichuris suis D918_02241 I 0.000
ECANG7_01760 Echinococcus canadensis ECANG7_01760 I 0.000
EFV53558 Trichinella spiralis EFV53558 I 0.000
egl-44 Caenorhabditis elegans WBGene00001208 I 0.000
ENSAMEG00000000632 Ailuropoda melanoleuca ENSAMEG00000000632 I 0.000
ENSAPLG00000016417 Anas platyrhynchos ENSAPLG00000016417 N 0.000
ENSCING00000019408 Ciona intestinalis ENSCING00000019408 I 0.000
ENSCJAG00000018829 Callithrix jacchus ENSCJAG00000018829 I 0.000
ENSCSAVG00000007634 Ciona savignyi ENSCSAVG00000007634 I 0.000
ENSDORG00000004435 Dipodomys ordii ENSDORG00000004435 I 0.000
ENSFALG00000003635 Ficedula albicollis ENSFALG00000003635 I 0.000
ENSGALG00000000953 Gallus gallus ENSGALG00000000953 I 0.000
ENSGMOG00000015271 Gadus morhua ENSGMOG00000015271 I 0.000
ENSLACG00000013349 Latimeria chalumnae ENSLACG00000013349 I 0.000
ENSLACG00000016444 Latimeria chalumnae ENSLACG00000016444 I 0.000
ENSLACG00000016717 Latimeria chalumnae ENSLACG00000016717 N 0.000
ENSLOCG00000004054 Lepisosteus oculatus ENSLOCG00000004054 I 0.000
ENSLOCG00000009736 Lepisosteus oculatus ENSLOCG00000009736 I 0.000
ENSMPUG00000003624 Mustela putorius furo ENSMPUG00000003624 I 0.000
ENSOANG00000021775 Ornithorhynchus anatinus ENSOANG00000021775 N 0.000
ENSOARG00000012126 Ovis aries ENSOARG00000012126 I 0.000
ENSONIG00000005991 Oreochromis niloticus ENSONIG00000005991 N 0.000
ENSP00000355332 Macaca fascicularis ENSP00000355332 N 0.000
ENSPFOG00000003170 Poecilia formosa ENSPFOG00000003170 I 0.000
ENSPFOG00000013997 Poecilia formosa ENSPFOG00000013997 I 0.000
ENSPPYG00000003475 Pongo abelii ENSPPYG00000003475 I 0.000
ENSPSIG00000006176 Pelodiscus sinensis ENSPSIG00000006176 I 0.000
ENSSHAG00000015930 Sarcophilus harrisii ENSSHAG00000015930 I 0.000
ENSTSYG00000001514 Tarsius syrichta ENSTSYG00000001514 N 0.000
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I 0.000
GA21152 Drosophila pseudoobscura FBgn0081140 I 0.000
Gfo_R013616 Geospiza fortis Gfo_R013616 N 0.000
GL22923 Drosophila persimilis FBgn0160513 I 0.000
GM22588 Drosophila sechellia FBgn0177458 I 0.000
HelroG146479 Helobdella robusta HelroG146479 I 0.000
HHAL001589-PA Halyomorpha halys HHAL001589-PA I 0.000
MDOA005382 Musca domestica MDOA005382 I 0.000
NBR_0001654801 Nippostrongylus brasiliensis NBR_0001654801 I 0.000
NBR_0002152001 Nippostrongylus brasiliensis NBR_0002152001 I 0.000
NEMVEDRAFT_v1g86806 Nematostella vectensis NEMVEDRAFT_v1g86806 I 0.000
nRc.2.0.1.g07693 Romanomermis culicivorax nRc.2.0.1.g07693 I 0.000
Ogr18322 Ophisaurus gracilis Ogr18322 I 0.000
PPAI001408 Phlebotomus papatasi PPAI001408 I 0.000
Pvit_05988 Pogona vitticeps Pvit_05988 I 0.000
Pvit_10291 Pogona vitticeps Pvit_10291 N 0.000
sd Drosophila melanogaster FBgn0003345 D 0.000
SMAR011013 Strigamia maritima SMAR011013 I 0.000
SMAR013465 Strigamia maritima SMAR013465 I 0.000
TEAD1 Bos taurus ENSBTAG00000032657 N 0.000
TEAD1 Canis familiaris ENSCAFG00000007976 I 0.000
TEAD1 Choloepus hoffmanni ENSCHOG00000001087 N 0.000
TEAD1 Callithrix jacchus ENSCJAG00000010263 I 0.000
TEAD1 Cavia porcellus ENSCPOG00000001830 N 0.000
Tead1 Dipodomys ordii ENSDORG00000013529 N 0.000
TEAD1 Equus caballus ENSECAG00000008332 I 0.000
TEAD1 Echinops telfairi ENSETEG00000009056 N 0.000
TEAD1 Homo sapiens ENSG00000187079 D 0.000
TEAD1 Gorilla gorilla ENSGGOG00000003412 N 0.000
TEAD1 Loxodonta africana ENSLAFG00000016484 I 0.000
TEAD1 Microcebus murinus ENSMICG00000007178 I 0.000
TEAD1 Macaca mulatta ENSMMUG00000010875 N 0.000
Tead1 Mus musculus ENSMUSG00000055320 D 0.000
TEAD1 Oryctolagus cuniculus ENSOCUG00000007955 I 0.000
TEAD1 Procavia capensis ENSPCAG00000013657 I 0.000
TEAD1 Pan troglodytes ENSPTRG00000039896 N 0.000
TEAD1 Sorex araneus ENSSARG00000001748 N 0.000
TEAD1 Taeniopygia guttata ENSTGUG00000015995 N 0.000
TEAD1 Tursiops truncatus ENSTTRG00000006621 N 0.000
TEAD1 Vicugna pacos ENSVPAG00000005288 N 0.000
tead1.S Xenopus laevis XB-GENE-5909161 N 0.000
tead1a Danio rerio ENSDARG00000028159 I 0.000
tead1a Takifugu rubripes ENSTRUG00000005940 I 0.000
tead1b Danio rerio ENSDARG00000059483 I 0.000
tead1b Gasterosteus aculeatus ENSGACG00000015715 I 0.000
TEAD2 Erinaceus europaeus ENSEEUG00000012244 I 0.000
TEAD2 Ornithorhynchus anatinus ENSOANG00000013933 N 0.000
TEAD2 Sus scrofa ENSSSCG00000025568 I 0.000
TEAD3 Canis familiaris ENSCAFG00000001326 I 0.000
Tead3 Dipodomys ordii ENSDORG00000010798 I 0.000
TEAD3 Equus caballus ENSECAG00000015056 I 0.000
TEAD3 Felis catus ENSFCAG00000012905 I 0.000
TEAD3 Homo sapiens ENSG00000007866 D 0.000
TEAD3 Gorilla gorilla ENSGGOG00000001847 I 0.000
TEAD3 Loxodonta africana ENSLAFG00000014818 I 0.000
TEAD3 Microcebus murinus ENSMICG00000000029 I 0.000
TEAD3 Macaca mulatta ENSMMUG00000015909 I 0.000
TEAD3 Otolemur garnettii ENSOGAG00000002943 I 0.000
TEAD3 Pan troglodytes ENSPTRG00000018086 I 0.000
TEAD3 Pteropus vampyrus ENSPVAG00000002764 I 0.000
TEAD3 Taeniopygia guttata ENSTGUG00000001691 I 0.000
TEAD3 Tursiops truncatus ENSTTRG00000009434 I 0.000
tead3a Gasterosteus aculeatus ENSGACG00000009758 I 0.000
tead3a Takifugu rubripes ENSTRUG00000011546 I 0.000
tead3b Danio rerio ENSDARG00000063649 I 0.000
tead3b Takifugu rubripes ENSTRUG00000018177 I 0.000
TEAD4 Dasypus novemcinctus ENSDNOG00000030589 I 0.000
TEAD4 Homo sapiens ENSG00000197905 D 0.000
TEAD4 Meleagris gallopavo ENSMGAG00000013910 I 0.000
Tead4 Mus musculus ENSMUSG00000030353 D 0.000
TEAD4 Oryzias latipes ENSORLG00000002553 I 0.000
TEAD4 Procavia capensis ENSPCAG00000013738 I 0.000
TEAD4 Takifugu rubripes ENSTRUG00000016489 I 0.000
TsM_000210300 Taenia solium TsM_000210300 I 0.000