Si024344m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si024344m.g T279841_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.676 0.753
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.676 0.753
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.676 0.753
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.675 0.763
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.675 0.763
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.675 0.763
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.675 0.763
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.675 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si024344m Myb 32 78
Si024344m Myb 84 129

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000008044 Chlorocebus sabaeus ENSCSAG00000008044 I 0.000
ENSEEUG00000006981 Erinaceus europaeus ENSEEUG00000006981 I 0.000
ENSMPUG00000001273 Mustela putorius furo ENSMPUG00000001273 I 0.000
ENSNLEG00000004577 Nomascus leucogenys ENSNLEG00000004577 I 0.000
ENSP00000289788 Macaca fascicularis ENSP00000289788 I 0.000
ENSPANG00000012448 Papio anubis ENSPANG00000012448 I 0.000
ENSPPYG00000016373 Pongo abelii ENSPPYG00000016373 I 0.000
ENSSTOG00000004477 Ictidomys tridecemlineatus ENSSTOG00000004477 I 0.000
ENSTSYG00000000711 Tarsius syrichta ENSTSYG00000000711 I 0.000
ZSCAN23 Bos taurus ENSBTAG00000037965 I 0.000
ZSCAN23 Equus caballus ENSECAG00000016879 I 0.000
ZSCAN23 Vicugna pacos ENSVPAG00000000043 I 0.000
ZSCAN23 Tursiops truncatus ENSTTRG00000015648 I 0.000
ZSCAN23 Sorex araneus ENSSARG00000008482 I 0.000
ZSCAN23 Pan troglodytes ENSPTRG00000017876 I 0.000
ZSCAN23 Procavia capensis ENSPCAG00000015061 I 0.000
ZSCAN23 Otolemur garnettii ENSOGAG00000006605 I 0.000
ZSCAN23 Oryctolagus cuniculus ENSOCUG00000029301 I 0.000
ZSCAN23 Canis familiaris ENSCAFG00000024985 I 0.000
ZSCAN23 Choloepus hoffmanni ENSCHOG00000004064 I 0.000
ZSCAN23 Macaca mulatta ENSMMUG00000012396 I 0.000
ZSCAN23 Microcebus murinus ENSMICG00000010510 I 0.000
ZSCAN23 Gorilla gorilla ENSGGOG00000024543 I 0.000
ZSCAN23 Callithrix jacchus ENSCJAG00000018616 I 0.000
ZSCAN9 Monodelphis domestica ENSMODG00000008321 I 0.000