Cla016403 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla016403 T283267_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.727 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla016403 Myb 287 337

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29637.m000753 Ricinus communis 29637.m000753 I 0.000
AMTR_s00131p00063460 Amborella trichopoda AMTR_s00131p00063460 I 0.000
AMTR_s00142p00049490 Amborella trichopoda AMTR_s00142p00049490 I 0.000
Aquca_017_00793 Aquilegia coerulea Aquca_017_00793 I 0.000
AT2G20400 Arabidopsis thaliana AT2G20400 D 0.000
BGIOSGA023563 Oryza indica BGIOSGA023563 I 0.000
Bo8g054450 Brassica oleracea Bo8g054450 I 0.000
Bo9g010090 Brassica oleracea Bo9g010090 I 0.000
Bostr.7867s0704 Boechera stricta Bostr.7867s0704 I 0.000
Bostr.7903s0128 Boechera stricta Bostr.7903s0128 I 0.000
Bra010355 Brassica rapa Bra010355 I 0.000
Bra036123 Brassica rapa Bra036123 I 0.000
BRADI1G28920 Brachypodium distachyon BRADI1G28920 I 0.000
BRADI1G34470 Brachypodium distachyon BRADI1G34470 I 0.000
BRADI1G63530 Brachypodium distachyon BRADI1G63530 I 0.000
BRADI4G27620 Brachypodium distachyon BRADI4G27620 I 0.000
Cagra.1225s0029 Capsella grandiflora Cagra.1225s0029 I 0.000
Cagra.8766s0002 Capsella grandiflora Cagra.8766s0002 I 0.000
Carubv10013614m.g Capsella rubella Carubv10013614m.g I 0.000
cassava37547.valid.m1 Manihot esculenta cassava37547.valid.m1 I 0.000
Ca_03781 Cicer arietinum Ca_03781 I 0.000
Ca_12255 Cicer arietinum Ca_12255 I 0.000
chr1.CM0295.930.nd Lotus japonicus chr1.CM0295.930.nd I 0.000
chr1.CM0600.200.nd Lotus japonicus chr1.CM0600.200.nd I 0.000
Ciclev10019956m.g Citrus clementina Ciclev10019956m.g I 0.000
estExt_fgenesh1_pg.C_4900005 Physcomitrella patens estExt_fgenesh1_pg.C_4900005 I 0.000
estExt_fgenesh1_pg.C_600033 Physcomitrella patens estExt_fgenesh1_pg.C_600033 I 0.000
estExt_fgenesh2_pg.C_1120045 Physcomitrella patens estExt_fgenesh2_pg.C_1120045 I 0.000
Eucgr.A01323 Eucalyptus grandis Eucgr.A01323 I 0.000
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.000
Eucgr.E04232 Eucalyptus grandis Eucgr.E04232 I 0.000
evm.TU.supercontig_87.3 Carica papaya evm.TU.supercontig_87.3 I 0.000
F775_05042 Aegilops tauschii F775_05042 I 0.000
F775_09661 Aegilops tauschii F775_09661 I 0.000
F775_09823 Aegilops tauschii F775_09823 I 0.000
F775_29452 Aegilops tauschii F775_29452 I 0.000
gene08317-v1.0-hybrid Fragaria vesca gene08317-v1.0-hybrid I 0.000
gene16679-v1.0-hybrid Fragaria vesca gene16679-v1.0-hybrid I 0.000
GLYMA03G32350 Glycine max GLYMA03G32350 I 0.000
GLYMA03G41040 Glycine max GLYMA03G41040 I 0.000
GLYMA10G04540 Glycine max GLYMA10G04540 I 0.000
GLYMA13G18805 Glycine max GLYMA13G18805 I 0.000
GLYMA19G35080 Glycine max GLYMA19G35080 I 0.000
GLYMA19G43690 Glycine max GLYMA19G43690 I 0.000
Gorai.007G149100 Gossypium raimondii Gorai.007G149100 I 0.000
GRMZM2G006477 Zea mays GRMZM2G006477 I 0.000
GRMZM2G010920 Zea mays GRMZM2G010920 I 0.000
GRMZM2G162409 Zea mays GRMZM2G162409 I 0.000
GSMUA_Achr11G02560_001 Musa acuminata GSMUA_Achr11G02560_001 I 0.000
GSMUA_Achr5G12960_001 Musa acuminata GSMUA_Achr5G12960_001 I 0.000
GSMUA_Achr8G12580_001 Musa acuminata GSMUA_Achr8G12580_001 I 0.000
LjSGA_026114.1 Lotus japonicus LjSGA_026114.1 I 0.000
LPERR02G03030 Leersia perrieri LPERR02G03030 I 0.000
LPERR02G30520 Leersia perrieri LPERR02G30520 I 0.000
LPERR03G14050 Leersia perrieri LPERR03G14050 I 0.000
LPERR07G10540 Leersia perrieri LPERR07G10540 I 0.000
Lus10022885.g Linum usitatissimum Lus10022885.g I 0.000
Lus10022886.g Linum usitatissimum Lus10022886.g I 0.000
Lus10024938.g Linum usitatissimum Lus10024938.g I 0.000
MDP0000132340 Malus domestica MDP0000132340 I 0.000
MDP0000159434 Malus domestica MDP0000159434 I 0.000
MDP0000248927 Malus domestica MDP0000248927 I 0.000
MDP0000285150 Malus domestica MDP0000285150 I 0.000
MDP0000321461 Malus domestica MDP0000321461 I 0.000
mgf005047m Mimulus guttatus mgf005047m I 0.000
mgf017208m Mimulus guttatus mgf017208m N 0.000
MLOC_54829 Hordeum vulgare MLOC_54829 I 0.000
MLOC_5837 Hordeum vulgare MLOC_5837 I 0.000
MLOC_60074 Hordeum vulgare MLOC_60074 I 0.000
MTR_1g080330 Medicago truncatula MTR_1g080330 I 0.000
MTR_7g098250 Medicago truncatula MTR_7g098250 I 0.000
OB02G12880 Oryza brachyantha OB02G12880 I 0.000
OB03G25800 Oryza brachyantha OB03G25800 I 0.000
OB06G34350 Oryza brachyantha OB06G34350 I 0.000
OB07G18720 Oryza brachyantha OB07G18720 I 0.000
OBART02G03200 Oryza barthii OBART02G03200 I 0.000
OBART07G12530 Oryza barthii OBART07G12530 I 0.000
OGLUM02G03100 Oryza glumaepatula OGLUM02G03100 I 0.000
OGLUM07G11980 Oryza glumaepatula OGLUM07G11980 I 0.000
OLONG_005622 Oryza longistaminata OLONG_005622 I 0.000
OLONG_021629 Oryza longistaminata OLONG_021629 I 0.000
OMERI02G03860 Oryza meridionalis OMERI02G03860 I 0.000
OMERI03G14370 Oryza meridionalis OMERI03G14370 I 0.000
OMERI07G09960 Oryza meridionalis OMERI07G09960 I 0.000
ONIVA02G03010 Oryza nivara ONIVA02G03010 I 0.000
ONIVA03G17050 Oryza nivara ONIVA03G17050 I 0.000
ONIVA07G10340 Oryza nivara ONIVA07G10340 I 0.000
OPUNC02G02530 Oryza punctata OPUNC02G02530 I 0.000
OPUNC03G15590 Oryza punctata OPUNC03G15590 I 0.000
OPUNC07G11150 Oryza punctata OPUNC07G11150 I 0.000
orange1.1g011805m.g Citrus sinensis orange1.1g011805m.g I 0.000
ORGLA02G0030200 Oryza glaberrima ORGLA02G0030200 I 0.000
ORGLA03G0154000 Oryza glaberrima ORGLA03G0154000 I 0.000
ORGLA06G0222600 Oryza glaberrima ORGLA06G0222600 I 0.000
ORGLA07G0105500 Oryza glaberrima ORGLA07G0105500 I 0.000
ORUFI02G03130 Oryza rufipogon ORUFI02G03130 I 0.000
ORUFI07G12650 Oryza rufipogon ORUFI07G12650 I 0.000
OS06G0703900 Oryza sativa OS06G0703900 I 0.000
Pavir.Aa03223 Panicum virgatum Pavir.Aa03223 I 0.000
Pavir.Ba02554 Panicum virgatum Pavir.Ba02554 I 0.000
Pavir.Bb01566 Panicum virgatum Pavir.Bb01566 I 0.000
Pavir.Db00228 Panicum virgatum Pavir.Db00228 I 0.000
Pavir.Ia03429 Panicum virgatum Pavir.Ia03429 I 0.000
Pavir.J14911 Panicum virgatum Pavir.J14911 I 0.000
Pavir.J27649 Panicum virgatum Pavir.J27649 I 0.000
Pavir.J39104 Panicum virgatum Pavir.J39104 I 0.000
PDK_20s1306081g005 Phoenix dactylifera PDK_20s1306081g005 I 0.000
PHR1 Arabidopsis thaliana AT4G28610 D 0.000
PHR1 Oryza indica BGIOSGA012553 I 0.000
PHR1 Arabidopsis lyrata fgenesh2_kg.7__1335__AT4G28610.1 I 0.000
PHR1 Oryza sativa OS03G0329900 D 0.000
PHR2 Oryza indica BGIOSGA025605 I 0.000
PHR2 Oryza sativa OS07G0438800 I 0.000
PHR3 Oryza indica BGIOSGA007162 I 0.000
PHR3 Oryza sativa OS02G0139000 I 0.000
PK01035.1 Cannabis sativa PK01035.1 I 0.000
PK01823.1 Cannabis sativa PK01823.1 I 0.000
PK16227.1 Cannabis sativa PK16227.1 I 0.000
Pm003600 Prunus mume Pm003600 I 0.000
POPTR_0002s25960 Populus trichocarpa POPTR_0002s25960 I 0.000
PRUPE_ppa004886mg Prunus persica PRUPE_ppa004886mg I 0.000
PRUPE_ppa005708mg Prunus persica PRUPE_ppa005708mg I 0.000
SapurV1A.0252s0390 Salix purpurea SapurV1A.0252s0390 I 0.000
Sb01g036440 Sorghum bicolor Sb01g036440 I 0.000
Sb02g010520 Sorghum bicolor Sb02g010520 I 0.000
Sb10g029200 Sorghum bicolor Sb10g029200 I 0.000
scaffold_304362.1 Arabidopsis lyrata scaffold_304362.1 I 0.000
Si006354m.g Setaria italica Si006354m.g I 0.000
Si017191m.g Setaria italica Si017191m.g I 0.000
Si029945m.g Setaria italica Si029945m.g I 0.000
Si035682m.g Setaria italica Si035682m.g I 0.000
Solyc06g008200.2 Solanum lycopersicum Solyc06g008200.2 I 0.000
Solyc09g072830.2 Solanum lycopersicum Solyc09g072830.2 I 0.000
TCM_003939 Theobroma cacao TCM_003939 I 0.000
TCM_026171 Theobroma cacao TCM_026171 I 0.000
Thhalv10002005m.g Eutrema salsugineum Thhalv10002005m.g I 0.000
Thhalv10025330m.g Eutrema salsugineum Thhalv10025330m.g I 0.000
TRAES3BF104900050CFD_g Triticum aestivum TRAES3BF104900050CFD_g I 0.000
Traes_3AS_6EEB8D2B2 Triticum aestivum Traes_3AS_6EEB8D2B2 I 0.000
Traes_5AL_6F77CFB03 Triticum aestivum Traes_5AL_6F77CFB03 I 0.000
Traes_5BL_A2C97A02D Triticum aestivum Traes_5BL_A2C97A02D I 0.000
Traes_5DL_EB47672ED Triticum aestivum Traes_5DL_EB47672ED I 0.000
Traes_6AS_DBE4E3146 Triticum aestivum Traes_6AS_DBE4E3146 I 0.000
Traes_6BS_00D311B94 Triticum aestivum Traes_6BS_00D311B94 I 0.000
Traes_6DS_20D189350 Triticum aestivum Traes_6DS_20D189350 I 0.000
Traes_7AL_D45376F32 Triticum aestivum Traes_7AL_D45376F32 I 0.000
Traes_7BL_09DD5A1DC Triticum aestivum Traes_7BL_09DD5A1DC I 0.000
Traes_7DL_090D0E08E Triticum aestivum Traes_7DL_090D0E08E I 0.000
TRIUR3_29870 Triticum urartu TRIUR3_29870 I 0.000
TRIUR3_32904 Triticum urartu TRIUR3_32904 I 0.000
VIT_07s0005g04120 Vitis vinifera VIT_07s0005g04120 I 0.000