Pm005332 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm005332 T283471_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.813 0.903
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.813 0.882
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.813 0.882
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.799 0.882
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.775 0.860
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.775 0.860
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.775 0.860
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.750 0.839
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.750 0.839
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.750 0.839
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.750 0.839
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.750 0.839
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.701 0.742
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.666 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm005332 Myb 12 58
Pm005332 Myb 64 109

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

321 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Brh_R000963 Buceros rhinoceros Brh_R000963 I 0.000
Cmyd_10008594 Chelonia mydas Cmyd_10008594 I 0.000
ENSAMEG00000018236 Ailuropoda melanoleuca ENSAMEG00000018236 I 0.000
ENSAPLG00000006795 Anas platyrhynchos ENSAPLG00000006795 I 0.000
ENSCSAG00000014415 Chlorocebus sabaeus ENSCSAG00000014415 I 0.000
ENSFALG00000011066 Ficedula albicollis ENSFALG00000011066 I 0.000
ENSOARG00000001457 Ovis aries ENSOARG00000001457 I 0.000
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I 0.000
Ogr05372 Ophisaurus gracilis Ogr05372 N 0.000
Pvit_04537 Pogona vitticeps Pvit_04537 I 0.000
REL Meleagris gallopavo ENSMGAG00000001721 I 0.000
REL Monodelphis domestica ENSMODG00000002172 I 0.000
Rel Mus musculus ENSMUSG00000020275 D 0.000
REL Gorilla gorilla ENSGGOG00000024826 I 0.000
REL Otolemur garnettii ENSOGAG00000013722 I 0.000
REL Gallus gallus ENSGALG00000007845 I 0.000
Rel Rattus norvegicus ENSRNOG00000054437 I 0.000
REL Sus scrofa ENSSSCG00000008388 I 0.000
REL Taeniopygia guttata ENSTGUG00000006743 I 0.000
REL Felis catus ENSFCAG00000008018 I 0.000
REL Equus caballus ENSECAG00000003277 I 0.000
REL Callithrix jacchus ENSCJAG00000008975 I 0.000
REL Canis familiaris ENSCAFG00000002981 I 0.000