Pm024725 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm024725 T283605_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.786 0.839
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.786 0.839
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.724 0.828
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm024725 Myb 9 56
Pm024725 Myb 62 107

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.669
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.668
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.793
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.788
Bo2g012170 Brassica oleracea Bo2g012170 I 0.786
Bo7g090950 Brassica oleracea Bo7g090950 I 0.747
Bo9g165670 Brassica oleracea Bo9g165670 I 0.768
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.702
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.763
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.786
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.724
Bra008740 Brassica rapa Bra008740 I 0.768
Bra023486 Brassica rapa Bra023486 I 0.750
Bra025311 Brassica rapa Bra025311 I 0.758
Bra025589 Brassica rapa Bra025589 I 0.724
Bra039065 Brassica rapa Bra039065 I 0.687
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.724
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.786
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.726
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.786
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.724
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.726
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.868
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.724
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.668
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.665
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.740
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.733
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.845
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N 0.689
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.665
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.679
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N 0.678
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N 0.678
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.714
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.803
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.803
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.686
gene31098-v1.0-hybrid Fragaria vesca gene31098-v1.0-hybrid I 0.666
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I 0.802
GL1 Arabidopsis thaliana AT3G27920 I 0.726
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.726
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.672
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.701
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.689
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.803
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.759
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.665
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I 0.745
MDP0000164048 Malus domestica MDP0000164048 I 0.739
MDP0000199965 Malus domestica MDP0000199965 I 0.705
MDP0000266683 Malus domestica MDP0000266683 I 0.795
MDP0000537324 Malus domestica MDP0000537324 I 0.748
MDP0000578193 Malus domestica MDP0000578193 I 0.867
MDP0000650225 Malus domestica MDP0000650225 I 0.881
MYB23 Arabidopsis thaliana AT5G40330 D 0.724
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.733
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.677
PK16315.1 Cannabis sativa PK16315.1 I 0.677
Pm006678 Prunus mume Pm006678 I 0.740
Pm013279 Prunus mume Pm013279 I 0.668
Pm027045 Prunus mume Pm027045 I 0.678
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.846
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.831
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I 0.745
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.668
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.861
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.740
SapurV1A.1178s0040 Salix purpurea SapurV1A.1178s0040 N 0.719
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.852
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.832
Si038905m.g Setaria italica Si038905m.g I 0.661
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.691
TCM_000535 Theobroma cacao TCM_000535 I 0.663
TCM_010360 Theobroma cacao TCM_010360 I 0.709
TCM_012057 Theobroma cacao TCM_012057 I 0.882
TCM_016886 Theobroma cacao TCM_016886 I 0.796
TCM_037377 Theobroma cacao TCM_037377 I 0.713
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.774
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.786
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.724
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.731
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.663
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.681
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.668
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.661
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.685
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.754
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.875
WER Arabidopsis thaliana AT5G14750 D 0.786
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.786