CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava14644.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava14644.m1
T284012_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava14644.m1
Myb
28
87
QQQWTEQETKDLIGIRAELEKDFTVAKRSKALWEIVSAKLRERGYRRTPDQCKCKWKNLV
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_gwp_gw1.C_2850022
Physcomitrella patens
estExt_gwp_gw1.C_2850022
N
0.690
evm.TU.supercontig_137.19
Carica papaya
evm.TU.supercontig_137.19
N
0.828
e_gw1.301.32.1
Physcomitrella patens
e_gw1.301.32.1
N
0.688
GSMUA_Achr7G04840_001
Musa acuminata
GSMUA_Achr7G04840_001
N
0.662
POPTR_0001s01210
Populus trichocarpa
POPTR_0001s01210
N
0.738
POPTR_0003s10360
Populus trichocarpa
POPTR_0003s10360
N
0.686
SapurV1A.1496s0030
Salix purpurea
SapurV1A.1496s0030
N
0.746
VIT_02s0087g00140
Vitis vinifera
VIT_02s0087g00140
N
0.678