Cucsa.312860 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.312860 T284516_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.909 0.979
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.909 0.979
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.875 0.979
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.875 0.979
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.821 0.936
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.667 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.312860.1 Myb 211 262

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27964.m000369 Ricinus communis 27964.m000369 I
29382.m000084 Ricinus communis 29382.m000084 I
29725.m000235 Ricinus communis 29725.m000235 I
30068.m002591 Ricinus communis 30068.m002591 I
AMTR_s00068p00207380 Amborella trichopoda AMTR_s00068p00207380 I
AMTR_s00113p00077540 Amborella trichopoda AMTR_s00113p00077540 I
ANAC012 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002619 I
ANAC070 Arabidopsis lyrata Al_scaffold_0006_3164 I
Aquca_014_00032 Aquilegia coerulea Aquca_014_00032 I
Aquca_030_00252 Aquilegia coerulea Aquca_030_00252 I
Aquca_037_00272 Aquilegia coerulea Aquca_037_00272 I
BGIOSGA007898 Oryza indica BGIOSGA007898 I
BGIOSGA015018 Oryza indica BGIOSGA015018 I
BGIOSGA021116 Oryza indica BGIOSGA021116 I
BGIOSGA022006 Oryza indica BGIOSGA022006 I
BGIOSGA027883 Oryza indica BGIOSGA027883 I
BGIOSGA034998 Oryza indica BGIOSGA034998 I
Bo2g095440 Brassica oleracea Bo2g095440 I
Bo4g006990 Brassica oleracea Bo4g006990 I
Bo4g197330 Brassica oleracea Bo4g197330 I
Bo5g049360 Brassica oleracea Bo5g049360 I
Bo5g086900 Brassica oleracea Bo5g086900 I
Bo6g079180 Brassica oleracea Bo6g079180 I
Bo6g080930 Brassica oleracea Bo6g080930 I
Bo6g123980 Brassica oleracea Bo6g123980 I
Bo9g088300 Brassica oleracea Bo9g088300 I
Bostr.13158s0196 Boechera stricta Bostr.13158s0196 I
Bostr.20129s0396 Boechera stricta Bostr.20129s0396 I
Bostr.25463s0283 Boechera stricta Bostr.25463s0283 I
Bostr.25993s0090 Boechera stricta Bostr.25993s0090 I
Bostr.3359s0081 Boechera stricta Bostr.3359s0081 I
Bra003478 Brassica rapa Bra003478 I
Bra003602 Brassica rapa Bra003602 I
Bra004509 Brassica rapa Bra004509 I
Bra007640 Brassica rapa Bra007640 I
Bra008423 Brassica rapa Bra008423 I
Bra010183 Brassica rapa Bra010183 I
Bra023288 Brassica rapa Bra023288 I
Bra035127 Brassica rapa Bra035127 I
Bra037914 Brassica rapa Bra037914 I
Bra040486 Brassica rapa Bra040486 I
BRADI1G38730 Brachypodium distachyon BRADI1G38730 I
BRADI3G09520 Brachypodium distachyon BRADI3G09520 I
BRADI3G13727 Brachypodium distachyon BRADI3G13727 I
BRADI5G11247 Brachypodium distachyon BRADI5G11247 I
BRN2 Arabidopsis thaliana AT4G10350 D
Cagra.0050s0024 Capsella grandiflora Cagra.0050s0024 I
Cagra.0483s0052 Capsella grandiflora Cagra.0483s0052 I
Cagra.12686s0005 Capsella grandiflora Cagra.12686s0005 I
Cagra.14513s0001 Capsella grandiflora Cagra.14513s0001 I
Cagra.1725s0032 Capsella grandiflora Cagra.1725s0032 I
Carubv10003879m.g Capsella rubella Carubv10003879m.g I
Carubv10011900m.g Capsella rubella Carubv10011900m.g I
Carubv10019223m.g Capsella rubella Carubv10019223m.g I
Carubv10020504m.g Capsella rubella Carubv10020504m.g I
Carubv10023503m.g Capsella rubella Carubv10023503m.g I
cassava32649.m1 Manihot esculenta cassava32649.m1 I
cassava32687.m1 Manihot esculenta cassava32687.m1 I
cassava33021.m1 Manihot esculenta cassava33021.m1 I
cassava39971.m1 Manihot esculenta cassava39971.m1 I
cassava42638.valid.m1 Manihot esculenta cassava42638.valid.m1 I
cassava45846.m1 Manihot esculenta cassava45846.m1 I
Ca_13929 Cicer arietinum Ca_13929 I
Ca_15792 Cicer arietinum Ca_15792 I
Ca_22425 Cicer arietinum Ca_22425 I
Ca_22426 Cicer arietinum Ca_22426 I
Ciclev10006623m.g Citrus clementina Ciclev10006623m.g I
Ciclev10021141m.g Citrus clementina Ciclev10021141m.g I
Ciclev10024035m.g Citrus clementina Ciclev10024035m.g I
Ciclev10024588m.g Citrus clementina Ciclev10024588m.g I
Cla005561 Citrullus lanatus Cla005561 I
Cla006806 Citrullus lanatus Cla006806 I
Cla011508 Citrullus lanatus Cla011508 I
Cla012576 Citrullus lanatus Cla012576 I
Cucsa.120870 Cucumis sativus Cucsa.120870 I
Cucsa.193460 Cucumis sativus Cucsa.193460 I
Cucsa.237820 Cucumis sativus Cucsa.237820 I
Cucsa.240210 Cucumis sativus Cucsa.240210 I
Eucgr.D01671 Eucalyptus grandis Eucgr.D01671 I
Eucgr.E01053 Eucalyptus grandis Eucgr.E01053 I
evm.TU.supercontig_118.26 Carica papaya evm.TU.supercontig_118.26 I
evm.TU.supercontig_37.89 Carica papaya evm.TU.supercontig_37.89 I
F775_11081 Aegilops tauschii F775_11081 I
F775_21627 Aegilops tauschii F775_21627 I
F775_23174 Aegilops tauschii F775_23174 I
F775_42361 Aegilops tauschii F775_42361 I
gene01881-v1.0-hybrid Fragaria vesca gene01881-v1.0-hybrid I
gene18635-v1.0-hybrid Fragaria vesca gene18635-v1.0-hybrid I
gene18636-v1.0-hybrid Fragaria vesca gene18636-v1.0-hybrid I
gene19898-v1.0-hybrid Fragaria vesca gene19898-v1.0-hybrid I
gene31175-v1.0-hybrid Fragaria vesca gene31175-v1.0-hybrid I
GLYMA07G05660 Glycine max GLYMA07G05660 I
GLYMA08G17140 Glycine max GLYMA08G17140 I
GLYMA09G36820 Glycine max GLYMA09G36820 I
GLYMA15G42050 Glycine max GLYMA15G42050 I
GLYMA16G02200 Glycine max GLYMA16G02200 I
GLYMA19G44890 Glycine max GLYMA19G44890 I
GLYMA19G44910 Glycine max GLYMA19G44910 N
Gorai.001G150800 Gossypium raimondii Gorai.001G150800 I
Gorai.003G077700 Gossypium raimondii Gorai.003G077700 I
Gorai.004G129200 Gossypium raimondii Gorai.004G129200 I
Gorai.004G267300 Gossypium raimondii Gorai.004G267300 I
Gorai.004G268500 Gossypium raimondii Gorai.004G268500 I
Gorai.006G205300 Gossypium raimondii Gorai.006G205300 I
Gorai.007G112500 Gossypium raimondii Gorai.007G112500 I
Gorai.008G130300 Gossypium raimondii Gorai.008G130300 I
Gorai.008G259700 Gossypium raimondii Gorai.008G259700 I
GRMZM2G041746 Zea mays GRMZM2G041746 I
GRMZM2G069047 Zea mays GRMZM2G069047 I
GRMZM2G091490 Zea mays GRMZM2G091490 I
GRMZM2G092465 Zea mays GRMZM2G092465 I
GRMZM2G099144 Zea mays GRMZM2G099144 I
GRMZM2G104074 Zea mays GRMZM2G104074 I
GRMZM2G155816 Zea mays GRMZM2G155816 I
GRMZM2G171395 Zea mays GRMZM2G171395 I
GRMZM2G435824 Zea mays GRMZM2G435824 I
GSMUA_Achr10G14400_001 Musa acuminata GSMUA_Achr10G14400_001 I
GSMUA_Achr10G21750_001 Musa acuminata GSMUA_Achr10G21750_001 I
GSMUA_Achr2G20020_001 Musa acuminata GSMUA_Achr2G20020_001 I
GSMUA_Achr3G12230_001 Musa acuminata GSMUA_Achr3G12230_001 I
GSMUA_Achr6G28890_001 Musa acuminata GSMUA_Achr6G28890_001 I
GSMUA_Achr7G05980_001 Musa acuminata GSMUA_Achr7G05980_001 I
GSMUA_Achr9G24450_001 Musa acuminata GSMUA_Achr9G24450_001 I
GSMUA_AchrUn_randomG21980_001 Musa acuminata GSMUA_AchrUn_randomG21980_001 I
LjSGA_027787.1 Lotus japonicus LjSGA_027787.1 I
LjSGA_059487.1 Lotus japonicus LjSGA_059487.1 I
LPERR02G09170 Leersia perrieri LPERR02G09170 I
LPERR06G01790 Leersia perrieri LPERR06G01790 I
LPERR06G14120 Leersia perrieri LPERR06G14120 I
LPERR08G01440 Leersia perrieri LPERR08G01440 I
Lus10001664.g Linum usitatissimum Lus10001664.g I
Lus10002687.g Linum usitatissimum Lus10002687.g I
Lus10008271.g Linum usitatissimum Lus10008271.g I
Lus10009939.g Linum usitatissimum Lus10009939.g I
Lus10013782.g Linum usitatissimum Lus10013782.g I
Lus10017340.g Linum usitatissimum Lus10017340.g I
Lus10030143.g Linum usitatissimum Lus10030143.g I
Lus10030205.g Linum usitatissimum Lus10030205.g I
Lus10033239.g Linum usitatissimum Lus10033239.g I
Lus10039153.g Linum usitatissimum Lus10039153.g I
MDP0000140229 Malus domestica MDP0000140229 I
MDP0000257674 Malus domestica MDP0000257674 I
MDP0000501518 Malus domestica MDP0000501518 I
MDP0000558493 Malus domestica MDP0000558493 I
MDP0000563165 Malus domestica MDP0000563165 I
MDP0000652584 Malus domestica MDP0000652584 I
MDP0000762302 Malus domestica MDP0000762302 D
mg017416m Mimulus guttatus mg017416m I
mgf022455m Mimulus guttatus mgf022455m I
mgf025569m Mimulus guttatus mgf025569m I
MLOC_17128 Hordeum vulgare MLOC_17128 I
MLOC_19175 Hordeum vulgare MLOC_19175 I
MLOC_66924 Hordeum vulgare MLOC_66924 I
MTR_2g062730 Medicago truncatula MTR_2g062730 I
MTR_4g035590 Medicago truncatula MTR_4g035590 I
MTR_8g024480 Medicago truncatula MTR_8g024480 I
NAC012 Arabidopsis thaliana AT1G32770 D
NAC043 Arabidopsis thaliana AT2G46770 D
NAC066 Arabidopsis thaliana AT3G61910 D
NST1 Arabidopsis lyrata scaffold_403649.1 I
NST2 Arabidopsis lyrata scaffold_503455.1 I
OB02G19660 Oryza brachyantha OB02G19660 I
OB04G21050 Oryza brachyantha OB04G21050 I
OB06G11970 Oryza brachyantha OB06G11970 I
OB06G24850 Oryza brachyantha OB06G24850 I
OB08G11290 Oryza brachyantha OB08G11290 I
OBART02G10820 Oryza barthii OBART02G10820 I
OBART04G13830 Oryza barthii OBART04G13830 I
OBART06G01950 Oryza barthii OBART06G01950 I
OBART06G17120 Oryza barthii OBART06G17120 I
OBART08G01110 Oryza barthii OBART08G01110 I
OGLUM02G10770 Oryza glumaepatula OGLUM02G10770 I
OGLUM04G13590 Oryza glumaepatula OGLUM04G13590 I
OGLUM06G01950 Oryza glumaepatula OGLUM06G01950 I
OGLUM06G18230 Oryza glumaepatula OGLUM06G18230 I
OGLUM08G01180 Oryza glumaepatula OGLUM08G01180 I
OLONG_007664 Oryza longistaminata OLONG_007664 I
OLONG_020428 Oryza longistaminata OLONG_020428 I
OMERI06G01850 Oryza meridionalis OMERI06G01850 I
OMERI06G17980 Oryza meridionalis OMERI06G17980 I
OMERI08G01360 Oryza meridionalis OMERI08G01360 I
ONIVA02G12010 Oryza nivara ONIVA02G12010 I
ONIVA04G12040 Oryza nivara ONIVA04G12040 I
ONIVA06G02290 Oryza nivara ONIVA06G02290 I
ONIVA06G20460 Oryza nivara ONIVA06G20460 I
ONIVA08G01130 Oryza nivara ONIVA08G01130 I
OPUNC02G09610 Oryza punctata OPUNC02G09610 I
OPUNC06G01800 Oryza punctata OPUNC06G01800 I
OPUNC06G15490 Oryza punctata OPUNC06G15490 I
OPUNC08G01110 Oryza punctata OPUNC08G01110 I
orange1.1g014260m.g Citrus sinensis orange1.1g014260m.g I
orange1.1g015853m.g Citrus sinensis orange1.1g015853m.g I
orange1.1g042376m.g Citrus sinensis orange1.1g042376m.g I
orange1.1g046523m.g Citrus sinensis orange1.1g046523m.g I
ORGLA02G0097800 Oryza glaberrima ORGLA02G0097800 I
ORGLA06G0019800 Oryza glaberrima ORGLA06G0019800 I
ORGLA08G0004900 Oryza glaberrima ORGLA08G0004900 I
ORUFI02G10740 Oryza rufipogon ORUFI02G10740 I
ORUFI04G15090 Oryza rufipogon ORUFI04G15090 I
ORUFI06G01950 Oryza rufipogon ORUFI06G01950 I
ORUFI06G18140 Oryza rufipogon ORUFI06G18140 I
ORUFI08G01170 Oryza rufipogon ORUFI08G01170 I
OS02G0252200 Oryza sativa OS02G0252200 I
OS06G0131700 Oryza sativa OS06G0131700 D
OS06G0530400 Oryza sativa OS06G0530400 I
OS08G0115800 Oryza sativa OS08G0115800 I
Pavir.Aa02770 Panicum virgatum Pavir.Aa02770 I
Pavir.Ab01037 Panicum virgatum Pavir.Ab01037 I
Pavir.Da01009 Panicum virgatum Pavir.Da01009 I
Pavir.Gb01599 Panicum virgatum Pavir.Gb01599 I
Pavir.J05053 Panicum virgatum Pavir.J05053 I
Pavir.J07268 Panicum virgatum Pavir.J07268 I
Pavir.J07835 Panicum virgatum Pavir.J07835 I
Pavir.J20698 Panicum virgatum Pavir.J20698 I
Pavir.J21162 Panicum virgatum Pavir.J21162 I
PDK_20s1408241g001 Phoenix dactylifera PDK_20s1408241g001 I
PDK_20s1484021g001 Phoenix dactylifera PDK_20s1484021g001 N
PGSC0003DMG400005807 Solanum tuberosum PGSC0003DMG400005807 I
PGSC0003DMG400009665 Solanum tuberosum PGSC0003DMG400009665 I
PGSC0003DMG400011268 Solanum tuberosum PGSC0003DMG400011268 I
PGSC0003DMG400012113 Solanum tuberosum PGSC0003DMG400012113 I
PK04961.1 Cannabis sativa PK04961.1 I
PK10271.1 Cannabis sativa PK10271.1 I
PK22182.1 Cannabis sativa PK22182.1 I
Pm010886 Prunus mume Pm010886 I
Pm018292 Prunus mume Pm018292 I
Pm022820 Prunus mume Pm022820 I
Pm024260 Prunus mume Pm024260 I
POPTR_0001s45250 Populus trichocarpa POPTR_0001s45250 I
POPTR_0002s17950 Populus trichocarpa POPTR_0002s17950 I
POPTR_0008s07950 Populus trichocarpa POPTR_0008s07950 I
POPTR_0010s18420 Populus trichocarpa POPTR_0010s18420 I
POPTR_0011s15640 Populus trichocarpa POPTR_0011s15640 I
POPTR_0014s10060 Populus trichocarpa POPTR_0014s10060 I
PRUPE_ppa006801mg Prunus persica PRUPE_ppa006801mg I
PRUPE_ppa020746mg Prunus persica PRUPE_ppa020746mg I
PRUPE_ppa025341mg Prunus persica PRUPE_ppa025341mg I
PRUPE_ppa026376mg Prunus persica PRUPE_ppa026376mg I
SapurV1A.0003s0530 Salix purpurea SapurV1A.0003s0530 I
SapurV1A.0093s0460 Salix purpurea SapurV1A.0093s0460 I
SapurV1A.0131s0060 Salix purpurea SapurV1A.0131s0060 I
SapurV1A.0162s0220 Salix purpurea SapurV1A.0162s0220 I
SapurV1A.0164s0070 Salix purpurea SapurV1A.0164s0070 I
SapurV1A.0941s0070 Salix purpurea SapurV1A.0941s0070 I
SapurV1A.2717s0010 Salix purpurea SapurV1A.2717s0010 I
Sb04g009180 Sorghum bicolor Sb04g009180 I
Sb06g017720 Sorghum bicolor Sb06g017720 I
Sb07g001550 Sorghum bicolor Sb07g001550 I
Sb10g002120 Sorghum bicolor Sb10g002120 I
Sb10g020860 Sorghum bicolor Sb10g020860 I
Si006565m.g Setaria italica Si006565m.g I
Si007822m.g Setaria italica Si007822m.g I
Si012319m.g Setaria italica Si012319m.g I
Si017641m.g Setaria italica Si017641m.g I
SMB Arabidopsis thaliana AT1G79580 D
SMB Arabidopsis lyrata scaffold_202942.1 I
SMB Vitis vinifera VIT_19s0085g01210 I
Solyc08g008660.2 Solanum lycopersicum Solyc08g008660.2 I
Solyc10g005010.2 Solanum lycopersicum Solyc10g005010.2 I
Solyc12g017400.1 Solanum lycopersicum Solyc12g017400.1 I
TCM_005047 Theobroma cacao TCM_005047 I
TCM_015621 Theobroma cacao TCM_015621 I
TCM_033728 Theobroma cacao TCM_033728 I
TCM_036034 Theobroma cacao TCM_036034 I
Thhalv10001506m.g Eutrema salsugineum Thhalv10001506m.g I
Thhalv10008226m.g Eutrema salsugineum Thhalv10008226m.g I
Thhalv10009336m.g Eutrema salsugineum Thhalv10009336m.g I
Thhalv10019534m.g Eutrema salsugineum Thhalv10019534m.g I
Thhalv10029403m.g Eutrema salsugineum Thhalv10029403m.g I
Traes_2AL_F0B17F0EA Triticum aestivum Traes_2AL_F0B17F0EA I
Traes_2BL_209C14A8F Triticum aestivum Traes_2BL_209C14A8F I
Traes_2DL_70F83D4B9 Triticum aestivum Traes_2DL_70F83D4B9 I
Traes_7AL_46F73E667 Triticum aestivum Traes_7AL_46F73E667 I
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I
Traes_7DL_AD6EAD1A6 Triticum aestivum Traes_7DL_AD6EAD1A6 I
Traes_7DL_AD6EAD1A61 Triticum aestivum Traes_7DL_AD6EAD1A61 I
TRIUR3_14210 Triticum urartu TRIUR3_14210 I
TRIUR3_14543 Triticum urartu TRIUR3_14543 I
TRIUR3_27911 Triticum urartu TRIUR3_27911 I
TRIUR3_28259 Triticum urartu TRIUR3_28259 I
TRIUR3_34571 Triticum urartu TRIUR3_34571 I
VIT_15s0048g02660 Vitis vinifera VIT_15s0048g02660 I
VIT_18s0089g01120 Vitis vinifera VIT_18s0089g01120 I