estExt_fgenesh4_pg.C_10375 (Volvox carteri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 estExt_fgenesh4_pg.C_10375 T284747_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.689 0.688
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.669 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh4_pg.C_10375 Myb 19 65
estExt_fgenesh4_pg.C_10375 Myb 71 116

Links

Other Myb/SANT family TFs
Other Volvox carteri TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29801.m003096 Ricinus communis 29801.m003096 I 0.663
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.670
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.669
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.677
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.669
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.669
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I 0.707
Carubv10013882m.g Capsella rubella Carubv10013882m.g I 0.707
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.689
CHLREDRAFT_116056 Chlamydomonas reinhardtii CHLREDRAFT_116056 I 0.794
CHLREDRAFT_116461 Chlamydomonas reinhardtii CHLREDRAFT_116461 N 0.667
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.670
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.672
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.689
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.682
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.698
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.689
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.689
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.666
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.673
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.693
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.666
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.664
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.686
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.669
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.689
gw1.18.142.1 Volvox carteri gw1.18.142.1 I 0.764
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.686
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.694
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.694
MDP0000203733 Malus domestica MDP0000203733 I 0.669
MDP0000284922 Malus domestica MDP0000284922 I 0.682
MDP0000319124 Malus domestica MDP0000319124 I 0.669
MDP0000478512 Malus domestica MDP0000478512 I 0.669
MDP0000807341 Malus domestica MDP0000807341 I 0.682
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.669
OB09G10200 Oryza brachyantha OB09G10200 I 0.669
OBART09G00310 Oryza barthii OBART09G00310 I 0.669
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.669
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.669
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.669
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.669
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.669
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.669
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.669
OPUNC06G19910 Oryza punctata OPUNC06G19910 I 0.671
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.669
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.689
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.672
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.669
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.669
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.669
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.669
OS02G0187700 Oryza sativa OS02G0187700 D 0.669
OS09G0106700 Oryza sativa OS09G0106700 I 0.669
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.677
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.669
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.669
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.669
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.686
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.667
PK07741.1 Cannabis sativa PK07741.1 D 0.689
Pm018862 Prunus mume Pm018862 I 0.678
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.666
SapurV1A.0262s0270 Salix purpurea SapurV1A.0262s0270 I 0.669
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.689
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.669
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.669
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.686
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.666
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.679
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.672
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.672
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.679
Si001686m.g Setaria italica Si001686m.g I 0.669
Si017917m.g Setaria italica Si017917m.g I 0.686
Si032789m.g Setaria italica Si032789m.g I 0.669
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.673
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.667
TCM_042629 Theobroma cacao TCM_042629 I 0.693
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.677
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.680