fgenesh1_pm.C_chr_2.1000495 (Pichia stipitis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pm.C_chr_2.1000495 T284924_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.662 0.750
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_chr_2.1000495 Myb 8 54
fgenesh1_pm.C_chr_2.1000495 Myb 60 104

Links

Other Myb/SANT family TFs
Other Pichia stipitis TFs

293 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo00576s150 Brassica oleracea Bo00576s150 N
Bo01093s010 Brassica oleracea Bo01093s010 N
Bo01167s020 Brassica oleracea Bo01167s020 N
Bo01294s010 Brassica oleracea Bo01294s010 N
Bo08089s010 Brassica oleracea Bo08089s010 N
Bo1g101740 Brassica oleracea Bo1g101740 N
Bo2g050430 Brassica oleracea Bo2g050430 N
Bo2g075660 Brassica oleracea Bo2g075660 N
Bo3g107290 Brassica oleracea Bo3g107290 N
Bo4g009340 Brassica oleracea Bo4g009340 N
Bo4g052050 Brassica oleracea Bo4g052050 N
Bo4g161430 Brassica oleracea Bo4g161430 N
Bo5g041280 Brassica oleracea Bo5g041280 N
Bo5g117160 Brassica oleracea Bo5g117160 N
Bo6g017000 Brassica oleracea Bo6g017000 N
Bo6g086640 Brassica oleracea Bo6g086640 N
Bo6g087610 Brassica oleracea Bo6g087610 N
Bo7g065570 Brassica oleracea Bo7g065570 N
Bo8g066500 Brassica oleracea Bo8g066500 N
Bo9g181220 Brassica oleracea Bo9g181220 N
Bostr.0597s0093 Boechera stricta Bostr.0597s0093 N
Bostr.12302s0059 Boechera stricta Bostr.12302s0059 N
Bostr.13404s0068 Boechera stricta Bostr.13404s0068 N
Bostr.7867s0394 Boechera stricta Bostr.7867s0394 N