Carubv10022245m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10022245m.g T286415_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022245m Myb 10 48
Carubv10022245m Myb 40 85

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00017p00086440 Amborella trichopoda AMTR_s00017p00086440 I
Aquca_017_00778 Aquilegia coerulea Aquca_017_00778 I
BGIOSGA004888 Oryza indica BGIOSGA004888 I
Bo8g027000 Brassica oleracea Bo8g027000 I
Bostr.1040s0032 Boechera stricta Bostr.1040s0032 I
Bra040971 Brassica rapa Bra040971 I
BRADI2G56320 Brachypodium distachyon BRADI2G56320 I
Cagra.12398s0002 Capsella grandiflora Cagra.12398s0002 I
Carubv10008876m.g Capsella rubella Carubv10008876m.g I
cassava22193.valid.m1 Manihot esculenta cassava22193.valid.m1 I
cassava24483.valid.m1 Manihot esculenta cassava24483.valid.m1 I
Ciclev10000850m.g Citrus clementina Ciclev10000850m.g I
Cla016623 Citrullus lanatus Cla016623 I
Cucsa.079940 Cucumis sativus Cucsa.079940 I
Eucgr.F02627 Eucalyptus grandis Eucgr.F02627 I
F775_04088 Aegilops tauschii F775_04088 I
gene27486-v1.0-hybrid Fragaria vesca gene27486-v1.0-hybrid I
GLYMA10G35940 Glycine max GLYMA10G35940 I
GLYMA16G27280 Glycine max GLYMA16G27280 I
GLYMA20G31650 Glycine max GLYMA20G31650 I
Gorai.006G131700 Gossypium raimondii Gorai.006G131700 I
GRMZM2G075956 Zea mays GRMZM2G075956 I
GRMZM2G129428 Zea mays GRMZM2G129428 I
GSMUA_Achr10G15970_001 Musa acuminata GSMUA_Achr10G15970_001 I
GSMUA_Achr5G01170_001 Musa acuminata GSMUA_Achr5G01170_001 I
LPERR01G33350 Leersia perrieri LPERR01G33350 I
LPERR03G34390 Leersia perrieri LPERR03G34390 I
Lus10009435.g Linum usitatissimum Lus10009435.g I
MDP0000141403 Malus domestica MDP0000141403 I
MDP0000199559 Malus domestica MDP0000199559 I
MDP0000453148 Malus domestica MDP0000453148 I
MDP0000551046 Malus domestica MDP0000551046 I
MDP0000807856 Malus domestica MDP0000807856 I
mgf000060m Mimulus guttatus mgf000060m I
MLOC_10987 Hordeum vulgare MLOC_10987 I
OB01G47470 Oryza brachyantha OB01G47470 I
OB03G47410 Oryza brachyantha OB03G47410 I
OBART01G38810 Oryza barthii OBART01G38810 I
OLONG_020555 Oryza longistaminata OLONG_020555 I
ONIVA01G43630 Oryza nivara ONIVA01G43630 I
OPUNC01G37530 Oryza punctata OPUNC01G37530 I
orange1.1g009831m.g Citrus sinensis orange1.1g009831m.g I
ORGLA01G0326400 Oryza glaberrima ORGLA01G0326400 I
ORUFI01G42150 Oryza rufipogon ORUFI01G42150 I
OS01G0871200 Oryza sativa OS01G0871200 I
Pavir.Ia00191 Panicum virgatum Pavir.Ia00191 I
Pavir.J01834 Panicum virgatum Pavir.J01834 I
Pavir.J06328 Panicum virgatum Pavir.J06328 I
Pavir.J12018 Panicum virgatum Pavir.J12018 I
Pavir.J14096 Panicum virgatum Pavir.J14096 I
PDK_20s1338731g001 Phoenix dactylifera PDK_20s1338731g001 I
PGSC0003DMG400009234 Solanum tuberosum PGSC0003DMG400009234 I
PGSC0003DMG400026081 Solanum tuberosum PGSC0003DMG400026081 I
PK23301.1 Cannabis sativa PK23301.1 I
Pm022201 Prunus mume Pm022201 I
POPTR_0019s11520 Populus trichocarpa POPTR_0019s11520 I
PRUPE_ppa004510mg Prunus persica PRUPE_ppa004510mg I
SapurV1A.0287s0150 Salix purpurea SapurV1A.0287s0150 I
SapurV1A.2334s0030 Salix purpurea SapurV1A.2334s0030 I
Sb01g001950 Sorghum bicolor Sb01g001950 I
Sb03g041170 Sorghum bicolor Sb03g041170 I
SELMODRAFT_48272 Selaginella moellendorffii SELMODRAFT_48272 I
SELMODRAFT_58350 Selaginella moellendorffii SELMODRAFT_58350 I
SELMODRAFT_58361 Selaginella moellendorffii SELMODRAFT_58361 I
SELMODRAFT_68340 Selaginella moellendorffii SELMODRAFT_68340 I
Si001053m.g Setaria italica Si001053m.g I
Si036555m.g Setaria italica Si036555m.g I
Solyc06g065440.1 Solanum lycopersicum Solyc06g065440.1 I
Solyc11g017140.1 Solanum lycopersicum Solyc11g017140.1 I
STOP1 Vitis vinifera VIT_18s0072g00840 I
STOP1 Arabidopsis lyrata fgenesh2_kg.1__3547__AT1G34370.2 I
STOP1 Arabidopsis thaliana AT1G34370 D
TCM_036719 Theobroma cacao TCM_036719 I
Thhalv10007411m.g Eutrema salsugineum Thhalv10007411m.g I
TRAES3BF044200110CFD_g Triticum aestivum TRAES3BF044200110CFD_g I
Traes_3AL_00FAACD5D Triticum aestivum Traes_3AL_00FAACD5D I
Traes_3DL_0284E68CC1 Triticum aestivum Traes_3DL_0284E68CC1 I
TRIUR3_13796 Triticum urartu TRIUR3_13796 I