Carubv10023675m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10023675m.g T286423_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.870 0.978
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.870 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10023675m Myb 39 106
Carubv10023684m Myb 39 106

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_08709 Capronia coronata A1O1_08709 I
A1O3_08094 Capronia epimyces A1O3_08094 I
A1O5_04435 Cladophialophora psammophila A1O5_04435 I
A1O7_03387 Cladophialophora yegresii A1O7_03387 I
A1O9_03458 Exophiala aquamarina A1O9_03458 I
A1O9_12959 Exophiala aquamarina A1O9_12959 I
ACLA_098160 Aspergillus clavatus CADACLAG00009206 I
AFUA_6G02330 Aspergillus fumigatus CADAFUAG00000640 I
AOL_s00004g648 Arthrobotrys oligospora AOL_s00004g648 I
ARB_01992 Arthroderma benhamiae ARB_01992 I
ATEG_07219 Aspergillus terreus CADATEAG00001089 I
Bcin09g01580 Botrytis cinerea Bcin09g01580 N
BDDG_07136 Blastomyces dermatitidis BDDG_07136 I
CADAFLAG00008794 Aspergillus flavus CADAFLAG00008794 I
CADANGAG00010285 Aspergillus niger CADANGAG00010285 I
EURHEDRAFT_452525 Aspergillus ruber EURHEDRAFT_452525 I
fgenesh1_pm.00855_#_114 Aspergillus carbonarius fgenesh1_pm.00855_#_114 I
G647_04998 Cladophialophora carrionii G647_04998 I
H101_06341 Trichophyton interdigitale H101_06341 I
H102_07503 Trichophyton rubrum H102_07503 I
H105_07531 Trichophyton soudanense H105_07531 I
HCBG_05620 Histoplasma capsulatum HCBG_05620 D
HMPREF1120_04468 Exophiala dermatitidis HMPREF1120_04468 I
HMPREF1541_04403 Cyphellophora europaea HMPREF1541_04403 I
MCYG_00576 Arthroderma otae MCYG_00576 I
MCYG_00576 Microsporum canis MCYG_00576 I
MGYG_01386 Microsporum gypseum MGYG_01386 I
NFIA_048590 Neosartorya fischeri CADNFIAG00005471 I
PABG_06482 Paracoccidioides brasiliensis PABG_06482 I
PMAA_018530 Penicillium marneffei PMAA_018530 I
PMAA_018530 Talaromyces marneffei PMAA_018530 I
PV04_03585 Capronia semiimmersa PV04_03585 N
PV05_05708 Exophiala xenobiotica PV05_05708 I
PV06_02748 Exophiala oligosperma PV06_02748 I
PV07_06716 Cladophialophora immunda PV07_06716 I
PV08_11124 Exophiala spinifera PV08_11124 I
PV10_05482 Exophiala mesophila PV10_05482 I
PV11_00872 Exophiala sideris PV11_00872 I
PVAR5_6560 Byssochlamys spectabilis PVAR5_6560 I
S40288_07681 Stachybotrys chartarum S40288_07681 N
TEQG_05447 Trichophyton equinum TEQG_05447 I
TESG_05799 Trichophyton tonsurans TESG_05799 I
TSTA_026540 Talaromyces stipitatus TSTA_026540 I
VHEMI07137 Torrubiella hemipterigena VHEMI07137 I
W97_05539 Coniosporium apollinis W97_05539 I
Z517_10389 Fonsecaea pedrosoi Z517_10389 I
Z518_01320 Rhinocladiella mackenziei Z518_01320 I
Z519_02267 Cladophialophora bantiana Z519_02267 I