Ciclev10012342m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10012342m.g T286554_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10012342m Myb 48 106

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_2382 Arabidopsis lyrata Al_scaffold_0004_2382 N 0.706
BGIOSGA014412 Oryza indica BGIOSGA014412 N 0.754
Bo3g032310 Brassica oleracea Bo3g032310 N 0.672
Bo4g029680 Brassica oleracea Bo4g029680 N 0.706
Bra000046 Brassica rapa Bra000046 N 0.672
Bra005127 Brassica rapa Bra005127 N 0.672
BRADI5G20847 Brachypodium distachyon BRADI5G20847 N 0.672
Cagra.4190s0013 Capsella grandiflora Cagra.4190s0013 N 0.667
cassava39493.m1 Manihot esculenta cassava39493.m1 N 0.783
Ca_10636 Cicer arietinum Ca_10636 N 0.751
chr2.CM0803.380.nc Lotus japonicus chr2.CM0803.380.nc N 0.751
Eucgr.E01205 Eucalyptus grandis Eucgr.E01205 N 0.707
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N 0.705
gene13452-v1.0-hybrid Fragaria vesca gene13452-v1.0-hybrid N 0.689
gene27722-v1.0-hybrid Fragaria vesca gene27722-v1.0-hybrid N 0.689
GLYMA01G35370 Glycine max GLYMA01G35370 N 0.751
Gorai.006G183000 Gossypium raimondii Gorai.006G183000 N 0.828
Gorai.012G114700 Gossypium raimondii Gorai.012G114700 N 0.751
GRMZM2G415229 Zea mays GRMZM2G415229 N 0.682
GT-3B Arabidopsis thaliana AT2G38250 N 0.706
Lus10004806.g Linum usitatissimum Lus10004806.g N 0.736
MDP0000269977 Malus domestica MDP0000269977 N 0.679
MDP0000296708 Malus domestica MDP0000296708 N 0.679
MTR_4g015680 Medicago truncatula MTR_4g015680 N 0.675
MTR_5g026540 Medicago truncatula MTR_5g026540 N 0.751
OGLUM04G24100 Oryza glumaepatula OGLUM04G24100 N 0.754
OMERI04G20000 Oryza meridionalis OMERI04G20000 N 0.754
ONIVA04G23310 Oryza nivara ONIVA04G23310 N 0.754
OPUNC04G21710 Oryza punctata OPUNC04G21710 N 0.707
orange1.1g022743m.g Citrus sinensis orange1.1g022743m.g N 0.909
ORGLA04G0207300 Oryza glaberrima ORGLA04G0207300 N 0.754
ORUFI04G25870 Oryza rufipogon ORUFI04G25870 N 0.754
PK23483.1 Cannabis sativa PK23483.1 N 0.668
POPTR_0001s01210 Populus trichocarpa POPTR_0001s01210 N 0.678
POPTR_0006s10240 Populus trichocarpa POPTR_0006s10240 N 0.705
POPTR_0016s12470 Populus trichocarpa POPTR_0016s12470 N 0.684
SapurV1A.0001s0490 Salix purpurea SapurV1A.0001s0490 N 0.705
SapurV1A.0541s0070 Salix purpurea SapurV1A.0541s0070 N 0.684
SapurV1A.1496s0030 Salix purpurea SapurV1A.1496s0030 N 0.678
TCM_021682 Theobroma cacao TCM_021682 N 0.875
VIT_08s0105g00400 Vitis vinifera VIT_08s0105g00400 N 0.743