Eucgr.C00865 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.C00865 T286790_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.741 0.745
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.741 0.745
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.741 0.745
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.741 0.745
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.737 0.809
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.709 0.766
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.709 0.766
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.692 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00865.1 Myb 5 57
Eucgr.C00865.2 Myb 5 57
Eucgr.C00865.3 Myb 5 57

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003708.1 Alligator sinensis Alligator_sinensis_CCG003708.1 N
Cmyd_10013223 Chelonia mydas Cmyd_10013223 N
ENSAMEG00000017065 Ailuropoda melanoleuca ENSAMEG00000017065 N
ENSAMXG00000006085 Astyanax mexicanus ENSAMXG00000006085 N
ENSAMXG00000008132 Astyanax mexicanus ENSAMXG00000008132 N
ENSAPLG00000013676 Anas platyrhynchos ENSAPLG00000013676 N
ENSBTAP00000019870-D1 Bos grunniens ENSBTAP00000019870-D1 N
ENSCSAG00000008212 Chlorocebus sabaeus ENSCSAG00000008212 N
ENSGMOG00000003455 Gadus morhua ENSGMOG00000003455 N
ENSLOCG00000000650 Lepisosteus oculatus ENSLOCG00000000650 N
ENSMEUG00000004384 Macropus eugenii ENSMEUG00000004384 N
ENSMPUG00000003040 Mustela putorius furo ENSMPUG00000003040 N
ENSNLEG00000006104 Nomascus leucogenys ENSNLEG00000006104 N
ENSOARG00000005005 Ovis aries ENSOARG00000005005 N
ENSONIG00000005476 Oreochromis niloticus ENSONIG00000005476 N
ENSP00000311196 Macaca fascicularis ENSP00000311196 N
ENSPANG00000007006 Papio anubis ENSPANG00000007006 N
ENSPFOG00000009551 Poecilia formosa ENSPFOG00000009551 N
ENSPPYG00000003026 Pongo abelii ENSPPYG00000003026 N
ENSSHAG00000009488 Sarcophilus harrisii ENSSHAG00000009488 N
ENSSTOG00000023146 Ictidomys tridecemlineatus ENSSTOG00000023146 N
ENSTSYG00000001991 Tarsius syrichta ENSTSYG00000001991 N
ENSXMAG00000013170 Xiphophorus maculatus ENSXMAG00000013170 N
Myotis_brandtii_NPAS4_10030769 Myotis brandtii Myotis_brandtii_NPAS4_10030769 N
NPAS4 Sus scrofa ENSSSCG00000012942 N
NPAS4 Pan troglodytes ENSPTRG00000003923 N
NPAS4 Pteropus vampyrus ENSPVAG00000001233 N
Npas4 Rattus norvegicus ENSRNOG00000020009 N
NPAS4 Sorex araneus ENSSARG00000003603 N
npas4 Xenopus tropicalis XB-GENE-993002 N
NPAS4 Tursiops truncatus ENSTTRG00000001951 N
NPAS4 Callithrix jacchus ENSCJAG00000001482 N
NPAS4 Canis familiaris ENSCAFG00000012711 N
NPAS4 Bos taurus ENSBTAG00000014925 N
NPAS4 Erinaceus europaeus ENSEEUG00000004685 N
NPAS4 Microcebus murinus ENSMICG00000003754 N
NPAS4 Felis catus ENSFCAG00000009299 N
NPAS4 Homo sapiens ENSG00000174576 N
NPAS4 Gorilla gorilla ENSGGOG00000008608 N
NPAS4 Equus caballus ENSECAG00000013683 N
NPAS4 Loxodonta africana ENSLAFG00000011138 N
NPAS4 Dasypus novemcinctus ENSDNOG00000042408 N
NPAS4 Myotis lucifugus ENSMLUG00000004042 N
NPAS4 Macaca mulatta ENSMMUG00000015982 N
NPAS4 Monodelphis domestica ENSMODG00000008299 N
Npas4 Mus musculus ENSMUSG00000045903 N
NPAS4 Cavia porcellus ENSCPOG00000000685 N
NPAS4 Oryctolagus cuniculus ENSOCUG00000000905 N
NPAS4 Otolemur garnettii ENSOGAG00000010446 N
npas4a Tetraodon nigroviridis ENSTNIG00000016823 N
npas4a Oryzias latipes ENSORLG00000001999 N
npas4a Danio rerio ENSDARG00000055752 N
npas4a Gasterosteus aculeatus ENSGACG00000017076 N
npas4b Danio rerio ENSDARG00000087753 N
Ogr08183 Ophisaurus gracilis Ogr08183 N
Pvit_07066 Pogona vitticeps Pvit_07066 N