CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G373500
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.007G373500
T287657_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G373500.1
Myb
349
399
QKMWTLMEVIKLVDGIAKYGVGRWTNIKKLLFASSTYRTPVDLRDKWRNLL
Gorai.007G373500.2
Myb
349
399
QKMWTLMEVIKLVDGIAKYGVGRWTNIKKLLFASSTYRTPVDLRDKWRNLL
Gorai.007G373500.3
Myb
324
374
QKMWTLMEVIKLVDGIAKYGVGRWTNIKKLLFASSTYRTPVDLRDKWRNLL
Gorai.007G373500.5
Myb
349
399
QKMWTLMEVIKLVDGIAKYGVGRWTNIKKLLFASSTYRTPVDLRDKWRNLL
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008836
Ricinus communis
30174.m008836
N
AMTR_s00059p00116150
Amborella trichopoda
AMTR_s00059p00116150
N
Aquca_013_00703
Aquilegia coerulea
Aquca_013_00703
N
cassava14439.m1
Manihot esculenta
cassava14439.m1
N
cassava17724.valid.m1
Manihot esculenta
cassava17724.valid.m1
N
Cla006768
Citrullus lanatus
Cla006768
N
Cla019628
Citrullus lanatus
Cla019628
N
Cucsa.120560
Cucumis sativus
Cucsa.120560
N
Cucsa.134530
Cucumis sativus
Cucsa.134530
N
Eucgr.E00457
Eucalyptus grandis
Eucgr.E00457
N
Eucgr.E01501
Eucalyptus grandis
Eucgr.E01501
N
Eucgr.E04309
Eucalyptus grandis
Eucgr.E04309
N
evm.TU.supercontig_29.132
Carica papaya
evm.TU.supercontig_29.132
N
evm.TU.supercontig_30.133
Carica papaya
evm.TU.supercontig_30.133
N
GLYMA09G05781
Glycine max
GLYMA09G05781
N
GLYMA11G17770
Glycine max
GLYMA11G17770
N
GLYMA15G17040
Glycine max
GLYMA15G17040
N
LjSGA_033751.1
Lotus japonicus
LjSGA_033751.1
N
Lus10009283.g
Linum usitatissimum
Lus10009283.g
N
Lus10015881.g
Linum usitatissimum
Lus10015881.g
N
MTR_2g055210
Medicago truncatula
MTR_2g055210
N
Pm017841
Prunus mume
Pm017841
N
PRUPE_ppa023785mg
Prunus persica
PRUPE_ppa023785mg
N
SapurV1A.0104s0310
Salix purpurea
SapurV1A.0104s0310
N
Solyc01g091000.2
Solanum lycopersicum
Solyc01g091000.2
N
TCM_005554
Theobroma cacao
TCM_005554
N
VIT_02s0154g00150
Vitis vinifera
VIT_02s0154g00150
N
VIT_15s0048g00580
Vitis vinifera
VIT_15s0048g00580
N