Lus10009884.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10009884.g T287929_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05790
M07119_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWHH
DDWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g05790_col_a 		0.740 0.819
AT3G11280
M01075_2.00 		Arabidopsis thaliana
NNTTATCNNN
NNNGATAANN		 PBM
Sullivan et al.(2014)
pTH7245 		0.736 0.819
AT3G11280
M07074_2.00 		Arabidopsis thaliana
DWDWDGATAAKRWW
WWYMTTATCHWHWH		 Dap-seq
OMalley et al.(2016)
At3g11280_col_a 		0.736 0.819
AT3G11280
M07075_2.00 		Arabidopsis thaliana
NNWNNDGATAAGRWHDNN
NNHDWYCTTATCHNNWNN		 Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a 		0.736 0.819
AT5G58900
M07146_2.00 		Arabidopsis thaliana
HHWWYCTTATCYWHW
WDWRGATAAGRWWDD		 Dap-seq
OMalley et al.(2016)
At5g58900_col_a 		0.725 0.766
AT5G58900
M07147_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWWH
DWWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a 		0.725 0.766
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.710 0.777
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.710 0.777
AT2G38090
M07055_2.00 		Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN
NVNRDWNWRGATAARNWTVDD		 Dap-seq
OMalley et al.(2016)
At2g38090_col_a 		0.678 0.766
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.663 0.777
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10009884 Myb 124 171

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgeneshMC_pg.C_10750 Mucor circinelloides estExt_fgeneshMC_pg.C_10750 N
estExt_fgeneshPB_pg.C_10936 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_10936 N
estExt_fgeneshPB_pg.C_110133 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_110133 N
estExt_fgeneshPB_pg.C_20275 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_20275 N
estExt_fgeneshPB_pg.C_30269 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_30269 N
estExt_fgeneshPB_pg.C_90126 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_90126 N
fgeneshMC_pg.10_#_227 Mucor circinelloides fgeneshMC_pg.10_#_227 N
fgeneshMC_pg.2_#_712 Mucor circinelloides fgeneshMC_pg.2_#_712 N
fgeneshMC_pg.4_#_438 Mucor circinelloides fgeneshMC_pg.4_#_438 N
GLOINDRAFT_319860 Rhizophagus irregularis GLOINDRAFT_319860 N
GYMLUDRAFT_40883 Gymnopus luxurians GYMLUDRAFT_40883 N
PFL1_03417 Pseudozyma flocculosa PFL1_03417 N
RO3G_03663 Rhizopus oryzae RO3G_03663 N
RO3G_04517 Rhizopus oryzae RO3G_04517 N
RO3G_04759 Rhizopus oryzae RO3G_04759 N
RO3G_06997 Rhizopus oryzae RO3G_06997 N
RO3G_07798 Rhizopus oryzae RO3G_07798 N
RO3G_07916 Rhizopus oryzae RO3G_07916 N
RO3G_16326 Rhizopus oryzae RO3G_16326 N
UM00750 Ustilago maydis UM00750 N