MDP0000191083 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000191083 T288389_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.909 0.989
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.909 0.989
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.814 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000191083 Myb 7 53
MDP0000191083 Myb 59 103

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000012673 Ailuropoda melanoleuca ENSAMEG00000012673 I 0.000
ENSCSAG00000003233 Chlorocebus sabaeus ENSCSAG00000003233 I 0.000
ENSDNOG00000032456 Dasypus novemcinctus ENSDNOG00000032456 I 0.000
ENSOARG00000009545 Ovis aries ENSOARG00000009545 I 0.000
ENSOPRG00000014981 Ochotona princeps ENSOPRG00000014981 I 0.000
ENSPANG00000007219 Papio anubis ENSPANG00000007219 I 0.000
ENSPPYG00000010103 Pongo abelii ENSPPYG00000010103 I 0.000
ENSPSIG00000012895 Pelodiscus sinensis ENSPSIG00000012895 I 0.000
ENSSTOG00000009056 Ictidomys tridecemlineatus ENSSTOG00000009056 I 0.000
Ogr08766 Ophisaurus gracilis Ogr08766 I 0.000
Pvit_18473 Pogona vitticeps Pvit_18473 I 0.000
Relb Dipodomys ordii ENSDORG00000003448 I 0.000
RELB Anolis carolinensis ENSACAG00000004079 I 0.000
RELB Bos taurus ENSBTAG00000038428 I 0.000
RELB Tursiops truncatus ENSTTRG00000015217 I 0.000
RELB Canis familiaris ENSCAFG00000004597 I 0.000
Relb Rattus norvegicus ENSRNOG00000033235 I 0.000
RELB Pteropus vampyrus ENSPVAG00000015952 I 0.000
RELB Pan troglodytes ENSPTRG00000011133 I 0.000
RELB Callithrix jacchus ENSCJAG00000012991 I 0.000
RELB Cavia porcellus ENSCPOG00000010273 I 0.000
RELB Procavia capensis ENSPCAG00000010787 I 0.000
RELB Homo sapiens ENSG00000104856 D 0.000
RELB Equus caballus ENSECAG00000020898 I 0.000
RELB Otolemur garnettii ENSOGAG00000012777 I 0.000
RELB Felis catus ENSFCAG00000025715 I 0.000
Relb Mus musculus ENSMUSG00000002983 D 0.000
RELB Monodelphis domestica ENSMODG00000020855 I 0.000
RELB Macaca mulatta ENSMMUG00000014153 I 0.000
RELB Myotis lucifugus ENSMLUG00000006593 I 0.000
RELB Microcebus murinus ENSMICG00000006991 I 0.000
RELB Gorilla gorilla ENSGGOG00000003380 I 0.000