CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LjT20L14.140.nd *(Lotus japonicus)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	LjT20L14.140.nd	T291032_2.00	Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q2TCH0_PETHY M11072_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PH4_01	0.834	0.914
MYB3 M02288_2.00	Arabidopsis thaliana	NNYACCTACCN	NGGTAGGTRNN	PBM Weirauch et al.(2014) pTH7125	0.672	0.699
MYB62 M07027_2.00	Arabidopsis thaliana	NHRCCTAAYTWNHNN	NNDNWARTTAGGYDN	Dap-seq OMalley et al.(2016) MYB62_col_a	0.666	0.624
MYB62 M07028_2.00	Arabidopsis thaliana	HNKRCCTAACTHH	DDAGTTAGGYMND	Dap-seq OMalley et al.(2016) MYB62_colamp_a	0.666	0.624
ATMYB121 M07091_2.00	Arabidopsis thaliana	NYNWACCTAMYHHH	DDDRKTAGGTWNRN	Dap-seq OMalley et al.(2016) MYB121_col_a	0.664	0.656
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LjT20L14.140.nd	Myb	40	87	RGPWTPEEDEVLASFIRKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL
LjT20L14.140.nd	Myb	93	138	RGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNFWNTHL

Links
Other Myb/SANT family TFs
Other *Lotus japonicus* TFs