Bo1g143830 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo1g143830 T292305_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.956 0.921
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.956 0.921
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.956 0.921
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.956 0.921
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.955 0.939
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.955 0.939
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.955 0.939
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g143830.1 NAC/NAM 14 140

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29830.m001444 Ricinus communis 29830.m001444 N
AMTR_s00044p00165760 Amborella trichopoda AMTR_s00044p00165760 N
Aquca_015_00350 Aquilegia coerulea Aquca_015_00350 N
Bo1g006340 Brassica oleracea Bo1g006340 N
Bostr.7867s1419 Boechera stricta Bostr.7867s1419 N
Bra011626 Brassica rapa Bra011626 N
Cagra.2350s0102 Capsella grandiflora Cagra.2350s0102 N
Carubv10005148m.g Capsella rubella Carubv10005148m.g N
cassava26650.m1 Manihot esculenta cassava26650.m1 N
chr2.CM0272.20.nd Lotus japonicus chr2.CM0272.20.nd N
Ciclev10027531m.g Citrus clementina Ciclev10027531m.g N
Cla014580 Citrullus lanatus Cla014580 N
Cucsa.044270 Cucumis sativus Cucsa.044270 N
gene13055-v1.0-hybrid Fragaria vesca gene13055-v1.0-hybrid N
GLYMA01G36360 Glycine max GLYMA01G36360 N
GLYMA11G09080 Glycine max GLYMA11G09080 N
Gorai.003G002500 Gossypium raimondii Gorai.003G002500 N
GSMUA_Achr8G13370_001 Musa acuminata GSMUA_Achr8G13370_001 N
MDP0000125133 Malus domestica MDP0000125133 N
MDP0000192895 Malus domestica MDP0000192895 N
MDP0000215412 Malus domestica MDP0000215412 N
MDP0000291622 Malus domestica MDP0000291622 N
MLOC_12609 Hordeum vulgare MLOC_12609 I
MTR_5g024070 Medicago truncatula MTR_5g024070 N
orange1.1g039420m.g Citrus sinensis orange1.1g039420m.g N
Pm026816 Prunus mume Pm026816 N
POPTR_0005s10400 Populus trichocarpa POPTR_0005s10400 N
PRUPE_ppa011563mg Prunus persica PRUPE_ppa011563mg N
RKD5 Arabidopsis thaliana AT4G35590 N
SapurV1A.0085s0060 Salix purpurea SapurV1A.0085s0060 N
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N
SELMODRAFT_73110 Selaginella moellendorffii SELMODRAFT_73110 N
SELMODRAFT_73113 Selaginella moellendorffii SELMODRAFT_73113 N
TCM_000070 Theobroma cacao TCM_000070 N
Thhalv10027037m.g Eutrema salsugineum Thhalv10027037m.g N
VIT_04s0044g00060 Vitis vinifera VIT_04s0044g00060 N