Bra034118 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra034118 T292674_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.952 0.947
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.952 0.947
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra034118.1-P NAC/NAM 26 152

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA014540 Oryza indica BGIOSGA014540 N
BRADI5G18430 Brachypodium distachyon BRADI5G18430 N
F775_07886 Aegilops tauschii F775_07886 N
F775_08955 Aegilops tauschii F775_08955 N
GRMZM2G057131 Zea mays GRMZM2G057131 N
GRMZM2G472589 Zea mays GRMZM2G472589 N
LPERR04G17810 Leersia perrieri LPERR04G17810 N
MLOC_11130 Hordeum vulgare MLOC_11130 N
MTR_0140s0010 Medicago truncatula MTR_0140s0010 I
OB04G28790 Oryza brachyantha OB04G28790 N
OBART04G21780 Oryza barthii OBART04G21780 N
OGLUM04G21810 Oryza glumaepatula OGLUM04G21810 N
OLONG_013577 Oryza longistaminata OLONG_013577 N
OMERI04G18340 Oryza meridionalis OMERI04G18340 N
ONIVA04G20320 Oryza nivara ONIVA04G20320 N
OPUNC04G19530 Oryza punctata OPUNC04G19530 N
ORGLA04G0188200 Oryza glaberrima ORGLA04G0188200 N
ORUFI09G04820 Oryza rufipogon ORUFI09G04820 N
OS04G0564000 Oryza sativa OS04G0564000 N
Pavir.Ga01021 Panicum virgatum Pavir.Ga01021 N
Pavir.J21884 Panicum virgatum Pavir.J21884 N
Sb06g025420 Sorghum bicolor Sb06g025420 N
Si010837m.g Setaria italica Si010837m.g N
Traes_2AL_39432DCB1 Triticum aestivum Traes_2AL_39432DCB1 N
Traes_2AL_BC4CD296F Triticum aestivum Traes_2AL_BC4CD296F N
Traes_2BL_7BC3DF5C7 Triticum aestivum Traes_2BL_7BC3DF5C7 N
Traes_2BL_E8D551BE0 Triticum aestivum Traes_2BL_E8D551BE0 N
Traes_2DL_92641C6CC Triticum aestivum Traes_2DL_92641C6CC N
Traes_2DL_D8AD25F43 Triticum aestivum Traes_2DL_D8AD25F43 N
TRIUR3_21912 Triticum urartu TRIUR3_21912 N
TRIUR3_21913 Triticum urartu TRIUR3_21913 N