GLYMA17G16500 (Glycine max)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 GLYMA17G16500 T293153_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac096
M07237_2.00 		Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC
GRTTDCKTVNNNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a 		0.939 0.798
anac096
M07238_2.00 		Arabidopsis thaliana
TTNCTTSWNNHNYAMG
CKTRNDNNWSAAGNAA		 Dap-seq
OMalley et al.(2016)
ANAC096_col 		0.939 0.798
anac071
M07219_2.00 		Arabidopsis thaliana
CTTSHNNYHCAMGYW
WRCKTGDRNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_col_a 		0.933 0.862
anac071
M07220_2.00 		Arabidopsis thaliana
CTTSHNNNNSAMGYA
TRCKTSNNNNDSAAG		 Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a 		0.933 0.862
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G16500.2 NAC/NAM 7 135

Links

Other NAC/NAM family TFs
Other Glycine max TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA034853 Oryza indica BGIOSGA034853 N
BGIOSGA037037 Oryza indica BGIOSGA037037 I
BRADI4G41890 Brachypodium distachyon BRADI4G41890 I
GRMZM2G079365 Zea mays GRMZM2G079365 I
GRMZM5G821024 Zea mays GRMZM5G821024 I
LPERR11G03390 Leersia perrieri LPERR11G03390 I
LPERR12G03530 Leersia perrieri LPERR12G03530 I
MLOC_71198 Hordeum vulgare MLOC_71198 I
OB11G13300 Oryza brachyantha OB11G13300 I
OB12G13750 Oryza brachyantha OB12G13750 I
OBART11G03920 Oryza barthii OBART11G03920 I
OBART12G03760 Oryza barthii OBART12G03760 I
OGLUM11G03630 Oryza glumaepatula OGLUM11G03630 N
OGLUM12G04480 Oryza glumaepatula OGLUM12G04480 I
OLONG_001598 Oryza longistaminata OLONG_001598 I
OMERI12G02030 Oryza meridionalis OMERI12G02030 I
ONIVA11G04030 Oryza nivara ONIVA11G04030 I
ONIVA12G03450 Oryza nivara ONIVA12G03450 I
OPUNC11G03640 Oryza punctata OPUNC11G03640 N
OPUNC12G03640 Oryza punctata OPUNC12G03640 N
ORGLA11G0036500 Oryza glaberrima ORGLA11G0036500 I
ORGLA12G0036800 Oryza glaberrima ORGLA12G0036800 I
ORUFI11G03840 Oryza rufipogon ORUFI11G03840 I
ORUFI12G04380 Oryza rufipogon ORUFI12G04380 I
OS11G0160500 Oryza sativa OS11G0160500 N
OS12G0162500 Oryza sativa OS12G0162500 I
Pavir.Ca00211 Panicum virgatum Pavir.Ca00211 I
Pavir.Cb01934 Panicum virgatum Pavir.Cb01934 N
Pavir.Ha01827 Panicum virgatum Pavir.Ha01827 I
Pavir.Hb01916 Panicum virgatum Pavir.Hb01916 I
POPTR_0005s21300 Populus trichocarpa POPTR_0005s21300 I
Sb05g003810 Sorghum bicolor Sb05g003810 I
Sb08g003940 Sorghum bicolor Sb08g003940 I
Si010549m.g Setaria italica Si010549m.g I
Si026605m.g Setaria italica Si026605m.g I
Traes_4AL_273ACCFFD Triticum aestivum Traes_4AL_273ACCFFD I
Traes_4BS_ED206A2BB Triticum aestivum Traes_4BS_ED206A2BB I
Traes_4DS_FE97492F2 Triticum aestivum Traes_4DS_FE97492F2 I
Traes_5BL_4700CC358 Triticum aestivum Traes_5BL_4700CC358 N
Traes_5DL_841444545 Triticum aestivum Traes_5DL_841444545 I
TRIUR3_12877 Triticum urartu TRIUR3_12877 I
TRIUR3_31416 Triticum urartu TRIUR3_31416 I