MLOC_75795 (Hordeum vulgare)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 MLOC_75795 T293725_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.991 0.912
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.990 0.912
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.966 0.719
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.966 0.719
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.951 0.728
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.951 0.728
PK11990.1
M01290_2.00 		Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH		 PBM
Lambert et al.(2019)
pTH11336 		0.904 0.746
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_75795.1 NAC/NAM 77 218
MLOC_75795.2 NAC/NAM 76 217
MLOC_75795.3 NAC/NAM 44 185
MLOC_75795.4 NAC/NAM 45 186
MLOC_75795.5 NAC/NAM 44 185
MLOC_75795.6 NAC/NAM 44 185

Links

Other NAC/NAM family TFs
Other Hordeum vulgare TFs

345 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_09248 Capronia epimyces A1O3_09248 N
A1O5_02239 Cladophialophora psammophila A1O5_02239 N
A1O7_07175 Cladophialophora yegresii A1O7_07175 N
A1O9_01806 Exophiala aquamarina A1O9_01806 N
G647_02931 Cladophialophora carrionii G647_02931 N
HMPREF1120_07588 Exophiala dermatitidis HMPREF1120_07588 N
HMPREF1541_07883 Cyphellophora europaea HMPREF1541_07883 N
PV04_07596 Capronia semiimmersa PV04_07596 N
PV05_05090 Exophiala xenobiotica PV05_05090 N
PV06_01288 Exophiala oligosperma PV06_01288 N
PV07_11175 Cladophialophora immunda PV07_11175 N
PV08_00236 Exophiala spinifera PV08_00236 N
PV10_06283 Exophiala mesophila PV10_06283 N
PV11_00728 Exophiala sideris PV11_00728 N
Z518_09345 Rhinocladiella mackenziei Z518_09345 N
Z519_11740 Cladophialophora bantiana Z519_11740 N