CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA06G0153500
(
Oryza glaberrima
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
ORGLA06G0153500
T294795_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK11990.1
M01290_2.00
Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH
PBM
Lambert et al.(2019)
pTH11336
0.948
0.754
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT
AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.920
0.781
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.920
0.781
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA06G0153500.1
NAC/NAM
55
230
PAGVKFDPTDQELIEHLEAKVRPGGEAAAHPLIDEFIPTIEGEDGICYTHPEKLPGVSKDGLSRHFFHRPSKAYTTGTRKRRKIQPPAAAASSSGGGGNASSSSSASAAAAVARHGHQQQQQQQRSETRWHKTGKTRAVVGGGRQRGCKKILVLYTNFGKHRKPEKTNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Oryza glaberrima
TFs
134 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL008953
Aedes aegypti
AAEL008953
N
AARA006160
Anopheles arabiensis
AARA006160
N
AATE017375
Anopheles atroparvus
AATE017375
N
ACOM040413
Anopheles coluzzii
ACOM040413
N
ACUA025938
Anopheles culicifacies
ACUA025938
N
ADAC003940
Anopheles darlingi
ADAC003940
N
ADIR014488
Anopheles dirus
ADIR014488
N
AFAF001710
Anopheles farauti
AFAF001710
N
AGAP001093
Anopheles gambiae
AGAP001093
N
AMAM009743
Anopheles maculatus
AMAM009743
N
AMEM009036
Anopheles merus
AMEM009036
N
AMIN005768
Anopheles minimus
AMIN005768
N
AQUA002561
Anopheles quadriannulatus
AQUA002561
N
ASIS023616
Anopheles sinensis
ASIS023616
N
ASTEI07779
Anopheles stephensi
ASTEI07779
N
CPIJ003767
Culex quinquefasciatus
CPIJ003767
N
CpipJ_CPIJ003767
Culex pipiens
CpipJ_CPIJ003767
N