POPTR_0010s23650 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0010s23650 T295294_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.936 0.921
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.936 0.921
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.936 0.921
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.936 0.921
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.925 0.904
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.925 0.904
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.925 0.904
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s23650.1 NAC/NAM 11 137
POPTR_0010s23650.2 NAC/NAM 11 137

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_02662 Beauveria bassiana BBA_02662 I
CCM_07768 Cordyceps militaris CCM_07768 N
e_gw1.6.920.1 Nectria haematococca e_gw1.6.920.1 I
F503_07199 Ophiostoma piceae uamh F503_07199 I
FGRRES_07198 Fusarium graminearum FGRRES_07198 D
FOXG_01595 Fusarium oxysporum FOXG_01595 I
FPSE_03183 Fusarium pseudograminearum FPSE_03183 I
FVEG_07955 Fusarium verticillioides FVEG_07955 I
HMPREF1624_04628 Sporothrix schenckii HMPREF1624_04628 I
MAJ_08974 Metarhizium majus MAJ_08974 I
MANI_121894 Metarhizium anisopliae MANI_121894 I
MBR_06137 Metarhizium brunneum MBR_06137 I
MGU_10045 Metarhizium guizhouense MGU_10045 I
NechaG49195 Fusarium solani NechaG49195 I
SPBR_05567 Sporothrix brasiliensis SPBR_05567 I
UCREL1_367 Eutypa lata UCREL1_367 I
VHEMI01120 Torrubiella hemipterigena VHEMI01120 I
X797_010350 Metarhizium robertsii X797_010350 I