CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g008010.1
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc11g008010.1
T295898_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g008010.1.1
NAC/NAM
98
224
APGFRFHPTDEELVRYYLRRKACGKPFRVEAVAEIDVYKSEPWDLKDYSALKTRDLEWYFFSPVDRKYGNGSRLNRATGEGYWKATGKDRNVNHNSKIIGMKKTLVFHKGRAPDGERTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_08371
Cicer arietinum
Ca_08371
I
0.873
chr5.CM0909.750.nc
Lotus japonicus
chr5.CM0909.750.nc
I
0.871
Ciclev10031606m.g
Citrus clementina
Ciclev10031606m.g
I
0.879
GLYMA10G34130
Glycine max
GLYMA10G34130
I
0.872
GLYMA20G33430
Glycine max
GLYMA20G33430
I
0.872
Gorai.009G309300
Gossypium raimondii
Gorai.009G309300
I
0.875
Gorai.012G007000
Gossypium raimondii
Gorai.012G007000
I
0.871
Lus10023537.g
Linum usitatissimum
Lus10023537.g
I
0.871
Lus10037939.g
Linum usitatissimum
Lus10037939.g
I
0.874
Lus10038670.g
Linum usitatissimum
Lus10038670.g
I
0.874
mgf012700m
Mimulus guttatus
mgf012700m
N
0.907
mgf020265m
Mimulus guttatus
mgf020265m
I
0.908
MTR_1g090720
Medicago truncatula
MTR_1g090720
I
0.874
orange1.1g014130m.g
Citrus sinensis
orange1.1g014130m.g
I
0.879
PGSC0003DMG400031072
Solanum tuberosum
PGSC0003DMG400031072
N
0.936
PGSC0003DMG401023373
Solanum tuberosum
PGSC0003DMG401023373
I
0.921
PK06477.1
Cannabis sativa
PK06477.1
I
0.879
POPTR_0010s23630
Populus trichocarpa
POPTR_0010s23630
I
0.880
SapurV1A.0213s0310
Salix purpurea
SapurV1A.0213s0310
I
0.880
Solyc05g055480.2
Solanum lycopersicum
Solyc05g055480.2
I
0.917