CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla013684
(
Citrullus lanatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cla013684
T296569_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
JUB1
M07191_2.00
Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR
Dap-seq
OMalley et al.(2016)
ANAC042_col_a
0.927
0.798
ANAC094
M07236_2.00
Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR
Dap-seq
OMalley et al.(2016)
ANAC094_col_a
0.897
0.702
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.873
0.684
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla013684
NAC/NAM
26
154
LPGFRFHPTDEELVNFYLRRKVHNKPLPIELIKQIDIYKYNPWDLPHASNGSLGEKEWYFFCKRGRKYKNSVRPNRVTGCGFWKATGIDKPIYINDRSIVVGLKKTLVYYRGSAGKGTKTEWMMNEFRL
Links
Other
NAC/NAM
family TFs
Other
Citrullus lanatus
TFs
266 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_040540
Albugo laibachii
ALNC14_040540
N
ALNC14_040550
Albugo laibachii
ALNC14_040550
N
ALNC14_040560
Albugo laibachii
ALNC14_040560
N
ALNC14_040570
Albugo laibachii
ALNC14_040570
N
ALNC14_040580
Albugo laibachii
ALNC14_040580
N
ALNC14_040590
Albugo laibachii
ALNC14_040590
N
ALNC14_040600
Albugo laibachii
ALNC14_040600
N
ALNC14_040610
Albugo laibachii
ALNC14_040610
N
ALNC14_040620
Albugo laibachii
ALNC14_040620
N
ALNC14_040630
Albugo laibachii
ALNC14_040630
N
ALNC14_040640
Albugo laibachii
ALNC14_040640
N
ALNC14_040650
Albugo laibachii
ALNC14_040650
N
ALNC14_040660
Albugo laibachii
ALNC14_040660
N
ALNC14_040670
Albugo laibachii
ALNC14_040670
N
ALNC14_040680
Albugo laibachii
ALNC14_040680
N
ALNC14_040690
Albugo laibachii
ALNC14_040690
N
ALNC14_040700
Albugo laibachii
ALNC14_040700
N
ALNC14_040710
Albugo laibachii
ALNC14_040710
N
ALNC14_040720
Albugo laibachii
ALNC14_040720
N
ALNC14_040730
Albugo laibachii
ALNC14_040730
N
ALNC14_040740
Albugo laibachii
ALNC14_040740
N
ALNC14_040750
Albugo laibachii
ALNC14_040750
N
ALNC14_040760
Albugo laibachii
ALNC14_040760
N
ALNC14_040770
Albugo laibachii
ALNC14_040770
N
ALNC14_040780
Albugo laibachii
ALNC14_040780
N
ALNC14_040790
Albugo laibachii
ALNC14_040790
N
ALNC14_040800
Albugo laibachii
ALNC14_040800
N
ALNC14_040810
Albugo laibachii
ALNC14_040810
N
ALNC14_040820
Albugo laibachii
ALNC14_040820
N
ALNC14_040830
Albugo laibachii
ALNC14_040830
N
ALNC14_040840
Albugo laibachii
ALNC14_040840
N
ALNC14_066630
Albugo laibachii
ALNC14_066630
N
ALNC14_090760
Albugo laibachii
ALNC14_090760
N
ALNC14_122900
Albugo laibachii
ALNC14_122900
N
estExt_fgenesh1_kg.C_10721
Phytophthora capsici
estExt_fgenesh1_kg.C_10721
N
estExt_fgenesh1_kg.C_21048
Phytophthora capsici
estExt_fgenesh1_kg.C_21048
N
estExt_fgenesh1_kg.C_21051
Phytophthora capsici
estExt_fgenesh1_kg.C_21051
N
estExt_fgenesh1_pg.C_230105
Phytophthora capsici
estExt_fgenesh1_pg.C_230105
N
F443_03190
Phytophthora parasitica
F443_03190
N
F443_06409
Phytophthora parasitica
F443_06409
N
F443_15811
Phytophthora parasitica
F443_15811
N
F443_18702
Phytophthora parasitica
F443_18702
N
F443_18703
Phytophthora parasitica
F443_18703
N
fgenesh-pir_contig_580-abinit-gene-0.31
Pythium irregulare
fgenesh-pir_contig_580-abinit-gene-0.31
N
fgenesh-piw_contig_392-abinit-gene-0.52
Pythium iwayamai
fgenesh-piw_contig_392-abinit-gene-0.52
N
fgenesh_scip_prom.28083.11749
Phytophthora lateralis
fgenesh_scip_prom.28083.11749
N
fgenesh_scip_prom.28083.4437
Phytophthora lateralis
fgenesh_scip_prom.28083.4437
N
fgenesh_scip_prom.28083.4438
Phytophthora lateralis
fgenesh_scip_prom.28083.4438
N
fgenesh_scip_prom.28083.520
Phytophthora lateralis
fgenesh_scip_prom.28083.520
N
fgenesh_scip_prom.46568.1669
Phytophthora kernoviae
fgenesh_scip_prom.46568.1669
N
fgenesh_scip_prom.46568.3588
Phytophthora kernoviae
fgenesh_scip_prom.46568.3588
N
fgenesh_scip_prom.46568.7094
Phytophthora kernoviae
fgenesh_scip_prom.46568.7094
N
fgenesh_scip_prom.46568.8092
Phytophthora kernoviae
fgenesh_scip_prom.46568.8092
N
fgenesh_scip_prom.46568.8093
Phytophthora kernoviae
fgenesh_scip_prom.46568.8093
N
HpaG802951
Hyaloperonospora arabidopsidis
HpaG802951
N
HpaG802952
Hyaloperonospora arabidopsidis
HpaG802952
N
HpaG808860
Hyaloperonospora arabidopsidis
HpaG808860
N
HpaG810973
Hyaloperonospora arabidopsidis
HpaG810973
N
maker-pag1_scaffold_1127-snap-gene-0.1
Pythium aphanidermatum
maker-pag1_scaffold_1127-snap-gene-0.1
I
maker-pag1_scaffold_183-snap-gene-0.28
Pythium aphanidermatum
maker-pag1_scaffold_183-snap-gene-0.28
N
maker-pag1_scaffold_287-snap-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_287-snap-gene-0.16
N
maker-pag1_scaffold_440-fgenesh-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_440-fgenesh-gene-0.4
N
maker-par_contig_1213-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_1213-fgenesh-gene-0.0
N
maker-par_contig_1213-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_1213-fgenesh-gene-0.2
N
maker-par_contig_601-snap-gene-0.2
Pythium arrhenomanes
maker-par_contig_601-snap-gene-0.2
N
maker-par_contig_654-snap-gene-0.10
Pythium arrhenomanes
maker-par_contig_654-snap-gene-0.10
N
maker-pir_contig_294-snap-gene-0.10
Pythium irregulare
maker-pir_contig_294-snap-gene-0.10
N
maker-pir_contig_320-snap-gene-0.13
Pythium irregulare
maker-pir_contig_320-snap-gene-0.13
N
maker-pir_contig_551-fgenesh-gene-0.4
Pythium irregulare
maker-pir_contig_551-fgenesh-gene-0.4
N
maker-pir_contig_698-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_698-fgenesh-gene-0.1
N
maker-pir_contig_85-snap-gene-0.26
Pythium irregulare
maker-pir_contig_85-snap-gene-0.26
N
maker-piw_contig_3132-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_3132-fgenesh-gene-0.1
N
maker-pve_contig_402-snap-gene-0.22
Pythium vexans
maker-pve_contig_402-snap-gene-0.22
N
maker-pve_contig_635-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_635-fgenesh-gene-0.0
N
maker-pve_contig_642-fgenesh-gene-0.1
Pythium vexans
maker-pve_contig_642-fgenesh-gene-0.1
N
maker-pve_contig_642-fgenesh-gene-0.5
Pythium vexans
maker-pve_contig_642-fgenesh-gene-0.5
N
Phyra73275
Phytophthora ramorum
Phyra73275
N
Phyra80975
Phytophthora ramorum
Phyra80975
N
Phyra84925
Phytophthora ramorum
Phyra84925
N
Phyra85976
Phytophthora ramorum
Phyra85976
N
Phyra95869
Phytophthora ramorum
Phyra95869
N
Physo129725
Phytophthora sojae
Physo129725
N
Physo129726
Phytophthora sojae
Physo129726
N
Physo131272
Phytophthora sojae
Physo131272
N
Physo134017
Phytophthora sojae
Physo134017
N
Physo134018
Phytophthora sojae
Physo134018
N
Physo144764
Phytophthora sojae
Physo144764
N
PITG_05353
Phytophthora infestans
PITG_05353
N
PITG_11760
Phytophthora infestans
PITG_11760
N
PITG_14513
Phytophthora infestans
PITG_14513
N
PITG_14514
Phytophthora infestans
PITG_14514
N
PITG_20646
Phytophthora infestans
PITG_20646
N
PITG_20647
Phytophthora infestans
PITG_20647
N
PITG_22459
Phytophthora infestans
PITG_22459
N
PYU1_G001667
Pythium ultimum
PYU1_G001667
N
PYU1_G003405
Pythium ultimum
PYU1_G003405
N
PYU1_G007450
Pythium ultimum
PYU1_G007450
N
PYU1_G009787
Pythium ultimum
PYU1_G009787
N
PYU1_G013874
Pythium ultimum
PYU1_G013874
N
PYU1_G013875
Pythium ultimum
PYU1_G013875
N
snap-par_contig_1252-abinit-gene-0.18
Pythium arrhenomanes
snap-par_contig_1252-abinit-gene-0.18
I
snap_masked-pve_contig_472-abinit-gene-0.36
Pythium vexans
snap_masked-pve_contig_472-abinit-gene-0.36
N
SPRG_00136
Saprolegnia parasitica
SPRG_00136
N
SPRG_01018
Saprolegnia parasitica
SPRG_01018
N
SPRG_04538
Saprolegnia parasitica
SPRG_04538
N
SPRG_06796
Saprolegnia parasitica
SPRG_06796
N
SPRG_09686
Saprolegnia parasitica
SPRG_09686
N