Pm017550 (Prunus mume)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pm017550 T296665_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.912 0.825
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.912 0.825
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.912 0.825
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.912 0.825
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.897 0.789
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.897 0.789
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.897 0.789
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm017550 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Prunus mume TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000468 Ricinus communis 29598.m000468 I
29883.m001986 Ricinus communis 29883.m001986 I
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I
Bra010010 Brassica rapa Bra010010 I
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I
cassava18832.valid.m1 Manihot esculenta cassava18832.valid.m1 I
cassava18833.valid.m1 Manihot esculenta cassava18833.valid.m1 I
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
GLYMA03G40730 Glycine max GLYMA03G40730 I
GLYMA19G43420 Glycine max GLYMA19G43420 I
Gorai.004G075400 Gossypium raimondii Gorai.004G075400 I
Gorai.004G218300 Gossypium raimondii Gorai.004G218300 I
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
LPERR12G15130 Leersia perrieri LPERR12G15130 I
Lus10006590.g Linum usitatissimum Lus10006590.g I
Lus10015913.g Linum usitatissimum Lus10015913.g I
Lus10018759.g Linum usitatissimum Lus10018759.g I
MDP0000176747 Malus domestica MDP0000176747 I
MDP0000270365 Malus domestica MDP0000270365 I
mgf009803m Mimulus guttatus mgf009803m I
OB06G31430 Oryza brachyantha OB06G31430 I
OPUNC12G16360 Oryza punctata OPUNC12G16360 I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
PK11472.1 Cannabis sativa PK11472.1 I
Pm005087 Prunus mume Pm005087 I
Pm020231 Prunus mume Pm020231 I
POPTR_0002s04660 Populus trichocarpa POPTR_0002s04660 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I
PRUPE_ppa007814mg Prunus persica PRUPE_ppa007814mg I
SapurV1A.0006s1330 Salix purpurea SapurV1A.0006s1330 I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I
SapurV1A.0860s0020 Salix purpurea SapurV1A.0860s0020 N
SapurV1A.2969s0020 Salix purpurea SapurV1A.2969s0020 N
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
TCM_004222 Theobroma cacao TCM_004222 I
TCM_026349 Theobroma cacao TCM_026349 I