Bostr.22252s0010 (Boechera stricta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Bostr.22252s0010 T297274_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.966 1.000
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.966 1.000
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.966 1.000
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.960 0.965
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.960 0.965
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.960 0.965
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.960 0.965
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.22252s0010.1.p NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Boechera stricta TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000012426 Ailuropoda melanoleuca ENSAMEG00000012426 I
ENSCSAG00000016725 Chlorocebus sabaeus ENSCSAG00000016725 I
ENSMMUP00000008532 Macaca fascicularis ENSMMUP00000008532 I
ENSMPUG00000011886 Mustela putorius furo ENSMPUG00000011886 I
ENSNLEG00000005878 Nomascus leucogenys ENSNLEG00000005878 I
ENSPANG00000020683 Papio anubis ENSPANG00000020683 I
ENSPPYG00000013971 Pongo abelii ENSPPYG00000013971 I
ENSSTOG00000009695 Ictidomys tridecemlineatus ENSSTOG00000009695 I
ZNF662 Canis familiaris ENSCAFG00000005374 I
ZNF662 Equus caballus ENSECAG00000010708 I
ZNF662 Homo sapiens ENSG00000182983 D
ZNF662 Macaca mulatta ENSMMUG00000006473 I
ZNF662 Pan troglodytes ENSPTRG00000040195 I