Cagra.14513s0001 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.14513s0001 T297395_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.966 1.000
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.954 0.930
NAC043
M02370_2.00 		Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN		 PBM
Weirauch et al.(2014)
pTH8161 		0.928 0.912
NAC043
M07192_2.00 		Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA		 Dap-seq
OMalley et al.(2016)
NST1_colamp_a 		0.928 0.912
NAC043
M07193_2.00 		Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY		 Dap-seq
OMalley et al.(2016)
NST1_col_v31 		0.928 0.912
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.916 0.816
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.916 0.816
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.916 0.886
BRN2
M07217_2.00 		Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG		 Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a 		0.902 0.807
BRN2
M07218_2.00 		Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA		 Dap-seq
OMalley et al.(2016)
ANAC070_col 		0.902 0.807
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.14513s0001.1.p NAC/NAM 17 144

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

286 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_06468 Arthroderma benhamiae ARB_06468 N
EURHEDRAFT_514859 Aspergillus ruber EURHEDRAFT_514859 N
H072_9038 Dactylellina haptotyla H072_9038 N
H102_06585 Trichophyton rubrum H102_06585 N
H105_06622 Trichophyton soudanense H105_06622 N
HMPREF1120_02123 Exophiala dermatitidis HMPREF1120_02123 N
MCYG_07695 Microsporum canis MCYG_07695 N
MGYG_05065 Microsporum gypseum MGYG_05065 N
MPH_00638 Macrophomina phaseolina MPH_00638 N
TEQG_00177 Trichophyton equinum TEQG_00177 N
TESG_03492 Trichophyton tonsurans TESG_03492 N
TRV_07088 Trichophyton verrucosum TRV_07088 N