Ciclev10032547m.g (Citrus clementina)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Ciclev10032547m.g T297644_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.921 0.858
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.921 0.858
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.921 0.858
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10032547m NAC/NAM 15 138
Ciclev10032865m NAC/NAM 15 138

Links

Other NAC/NAM family TFs
Other Citrus clementina TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_030720 Aspergillus clavatus CADACLAG00002636 I
AFUA_1G03860 Aspergillus fumigatus CADAFUAG00008577 I
amdR Aspergillus nidulans CADANIAG00004647 D
ARB_01305 Arthroderma benhamiae ARB_01305 I
ATEG_03826 Aspergillus terreus CADATEAG00009146 I
BDDG_02000 Blastomyces dermatitidis BDDG_02000 I
CADAFLAG00002231 Aspergillus flavus CADAFLAG00002231 I
CADANGAG00000260 Aspergillus niger CADANGAG00000260 I
CADAORAG00001528 Aspergillus oryzae CADAORAG00001528 I
CIMG_04625 Coccidioides immitis CIMG_04625 I
CPC735_071800 Coccidioides posadasii CPC735_071800 I
EURHEDRAFT_457629 Aspergillus ruber EURHEDRAFT_457629 I
e_gw1.00129.103.1 Aspergillus carbonarius e_gw1.00129.103.1 I
H102_03399 Trichophyton rubrum H102_03399 I
H105_03420 Trichophyton soudanense H105_03420 I
HCBG_00538 Histoplasma capsulatum HCBG_00538 I
MCYG_05808 Microsporum canis MCYG_05808 I
MCYG_05808 Arthroderma otae MCYG_05808 I
NFIA_020820 Neosartorya fischeri CADNFIAG00001564 I
PAAG_05745 Paracoccidioides sp lutzii PAAG_05745 I
PABG_06313 Paracoccidioides brasiliensis PABG_06313 I
Pc16g08250 Penicillium chrysogenum Pc16g08250 I
PCH_Pc16g08250 Penicillium rubens PCH_Pc16g08250 I
PDE_02833 Penicillium oxalicum PDE_02833 I
PDIP_21350 Penicillium digitatum PDIP_21350 I
PEX1_002190 Penicillium expansum PEX1_002190 I
PITC_030840 Penicillium italicum PITC_030840 I
PMAA_055050 Talaromyces marneffei PMAA_055050 I
PMAA_055050 Penicillium marneffei PMAA_055050 I
TESG_08028 Trichophyton tonsurans TESG_08028 I
TSTA_017820 Talaromyces stipitatus TSTA_017820 I
U727_00433100421 Penicillium solitum U727_00433100421 I
UREG_01825 Uncinocarpus reesii UREG_01825 I