Gorai.004G267300 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.004G267300 T298071_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRN2
M07217_2.00 		Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG		 Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a 		0.971 0.921
BRN2
M07218_2.00 		Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA		 Dap-seq
OMalley et al.(2016)
ANAC070_col 		0.971 0.921
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.924 0.825
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.924 0.825
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.914 0.789
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.900 0.789
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.871 0.781
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G267300.1 NAC/NAM 9 136

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
atoh8 Danio rerio ENSDARG00000037555 N 0.000
ATOH8 Microcebus murinus ENSMICG00000007934 N 0.000
ATOH8 Loxodonta africana ENSLAFG00000027790 N 0.000
ATOH8 Myotis lucifugus ENSMLUG00000011394 N 0.000
ATOH8 Monodelphis domestica ENSMODG00000004038 N 0.000
Atoh8 Mus musculus ENSMUSG00000037621 N 0.000
ATOH8 Oryctolagus cuniculus ENSOCUG00000003528 N 0.000
ATOH8 Homo sapiens ENSG00000168874 N 0.000
ATOH8 Felis catus ENSFCAG00000022157 N 0.000
ATOH8 Otolemur garnettii ENSOGAG00000025987 N 0.000
ATOH8 Dasypus novemcinctus ENSDNOG00000047321 N 0.000
ATOH8 Procavia capensis ENSPCAG00000015209 N 0.000
ATOH8 Pteropus vampyrus ENSPVAG00000001652 N 0.000
ATOH8 Cavia porcellus ENSCPOG00000006364 N 0.000
ATOH8 Callithrix jacchus ENSCJAG00000019571 N 0.000
Atoh8 Rattus norvegicus ENSRNOG00000010716 N 0.000
ATOH8 Bos taurus ENSBTAG00000024000 N 0.000
ATOH8 Sus scrofa ENSSSCG00000008230 N 0.000
ATOH8 Tursiops truncatus ENSTTRG00000011260 N 0.000
atoh8 Xenopus tropicalis XB-GENE-877027 N 0.000
BGLB001926 Biomphalaria glabrata BGLB001926 N 0.000
CapteG157958 Capitella teleta CapteG157958 N 0.000
CGI_10011834 Crassostrea gigas CGI_10011834 N 0.000
ENSACAG00000006693 Anolis carolinensis ENSACAG00000006693 N 0.000
ENSAMEG00000005787 Ailuropoda melanoleuca ENSAMEG00000005787 N 0.000
ENSBTAP00000032978-D1 Bos grunniens ENSBTAP00000032978-D1 N 0.000
ENSCAFG00000007657 Canis familiaris ENSCAFG00000007657 N 0.000
ENSCSAG00000016234 Chlorocebus sabaeus ENSCSAG00000016234 N 0.000
ENSCSAVG00000004566 Ciona savignyi ENSCSAVG00000004566 N 0.000
ENSECAG00000015799 Equus caballus ENSECAG00000015799 N 0.000
ENSGACG00000019554 Gasterosteus aculeatus ENSGACG00000019554 N 0.000
ENSGGOG00000023858 Gorilla gorilla ENSGGOG00000023858 N 0.000
ENSGMOG00000015329 Gadus morhua ENSGMOG00000015329 N 0.000
ENSLACG00000006436 Latimeria chalumnae ENSLACG00000006436 N 0.000
ENSLOCG00000010919 Lepisosteus oculatus ENSLOCG00000010919 N 0.000
ENSMGAG00000013108 Meleagris gallopavo ENSMGAG00000013108 N 0.000
ENSMMUG00000019558 Macaca mulatta ENSMMUG00000019558 N 0.000
ENSMPUG00000009121 Mustela putorius furo ENSMPUG00000009121 N 0.000
ENSOPRG00000010781 Ochotona princeps ENSOPRG00000010781 N 0.000
ENSP00000366553 Macaca fascicularis ENSP00000366553 N 0.000
ENSPANG00000020858 Papio anubis ENSPANG00000020858 N 0.000
ENSPFOG00000014589 Poecilia formosa ENSPFOG00000014589 N 0.000
ENSPPYG00000012219 Pongo abelii ENSPPYG00000012219 N 0.000
ENSSTOG00000006538 Ictidomys tridecemlineatus ENSSTOG00000006538 N 0.000
ENSTBEG00000008003 Tupaia belangeri ENSTBEG00000008003 N 0.000
ENSTNIG00000000721 Tetraodon nigroviridis ENSTNIG00000000721 N 0.000
ENSTRUG00000000986 Takifugu rubripes ENSTRUG00000000986 N 0.000
ENSXMAG00000019079 Xiphophorus maculatus ENSXMAG00000019079 N 0.000
fgenesh2_pg.scaffold_9000228 Branchiostoma floridae fgenesh2_pg.scaffold_9000228 N 0.000
fgenesh2_pg.scaffold_9000241 Branchiostoma floridae fgenesh2_pg.scaffold_9000241 N 0.000
ISCW011969 Ixodes scapularis ISCW011969 N 0.000
LotgiG99796 Lottia gigantea LotgiG99796 N 0.000
Myotis_brandtii_Atoh8_10004590 Myotis brandtii Myotis_brandtii_Atoh8_10004590 N 0.000
Ogr18256 Ophisaurus gracilis Ogr18256 N 0.000
Pvit_12640 Pogona vitticeps Pvit_12640 N 0.000
Sakowv30034602m.g Saccoglossus kowalevskii Sakowv30034602m.g N 0.000
SMAR005703 Strigamia maritima SMAR005703 N 0.000
SPU_011315 Strongylocentrotus purpuratus SPU_011315 N 0.000
SPU_017983 Strongylocentrotus purpuratus SPU_017983 N 0.000