CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.012G083700
(
Gossypium raimondii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Gorai.012G083700
T298175_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.012G083700.1
NAC/NAM
4
119
PIGFRFHPTDEELVVHYLKRKALSLPLPASVISEFDVLGTHPWSLPGEVNEKRYFFSSRGRDGGGSGGYWKPIGKEKPIIETGSNEVVGMRRALIFCGRKPSNHTNTRWFLHQYRL
Links
Other
NAC/NAM
family TFs
Other
Gossypium raimondii
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29685.m000503
Ricinus communis
29685.m000503
N
29889.m003255
Ricinus communis
29889.m003255
N
Aquca_008_00101
Aquilegia coerulea
Aquca_008_00101
N
Aquca_025_00175
Aquilegia coerulea
Aquca_025_00175
N
BGIOSGA012540
Oryza indica
BGIOSGA012540
N
Bo5g010680
Brassica oleracea
Bo5g010680
N
Bostr.13671s0465
Boechera stricta
Bostr.13671s0465
N
BRADI5G11330
Brachypodium distachyon
BRADI5G11330
N
Cagra.4395s0212
Capsella grandiflora
Cagra.4395s0212
N
Carubv10012599m.g
Capsella rubella
Carubv10012599m.g
N
cassava25471.m1
Manihot esculenta
cassava25471.m1
N
cassava28226.m1
Manihot esculenta
cassava28226.m1
N
Ciclev10000456m.g
Citrus clementina
Ciclev10000456m.g
N
Ciclev10004395m.g
Citrus clementina
Ciclev10004395m.g
N
Cucsa.019230
Cucumis sativus
Cucsa.019230
N
Eucgr.G00085
Eucalyptus grandis
Eucgr.G00085
N
Eucgr.K03522
Eucalyptus grandis
Eucgr.K03522
N
evm.TU.supercontig_113.2
Carica papaya
evm.TU.supercontig_113.2
N
evm.TU.supercontig_151.57
Carica papaya
evm.TU.supercontig_151.57
N
FRS11
Arabidopsis thaliana
AT1G10240
N
gene05172-v1.0-hybrid
Fragaria vesca
gene05172-v1.0-hybrid
N
gene29088-v1.0-hybrid
Fragaria vesca
gene29088-v1.0-hybrid
N
GLYMA09G04394
Glycine max
GLYMA09G04394
N
GLYMA10G00380
Glycine max
GLYMA10G00380
N
GLYMA15G15450
Glycine max
GLYMA15G15450
N
Gorai.006G118900
Gossypium raimondii
Gorai.006G118900
N
Gorai.011G195800
Gossypium raimondii
Gorai.011G195800
N
MDP0000233216
Malus domestica
MDP0000233216
N
MDP0000234814
Malus domestica
MDP0000234814
N
MDP0000786741
Malus domestica
MDP0000786741
N
MLOC_15705
Hordeum vulgare
MLOC_15705
N
OB04G20960
Oryza brachyantha
OB04G20960
N
orange1.1g004420m.g
Citrus sinensis
orange1.1g004420m.g
N
orange1.1g047253m.g
Citrus sinensis
orange1.1g047253m.g
N
ORGLA04G0107700
Oryza glaberrima
ORGLA04G0107700
N
OS04G0443000
Oryza sativa
OS04G0443000
N
PDK_20s1635961g004
Phoenix dactylifera
PDK_20s1635961g004
N
PDK_20s1722071g001
Phoenix dactylifera
PDK_20s1722071g001
N
PDK_20s1756181g001
Phoenix dactylifera
PDK_20s1756181g001
N
PK06148.1
Cannabis sativa
PK06148.1
N
PK12746.1
Cannabis sativa
PK12746.1
N
Pm003854
Prunus mume
Pm003854
N
Pm008290
Prunus mume
Pm008290
N
POPTR_0002s20030
Populus trichocarpa
POPTR_0002s20030
N
PRUPE_ppa002003mg
Prunus persica
PRUPE_ppa002003mg
N
PRUPE_ppa002379mg
Prunus persica
PRUPE_ppa002379mg
N
SapurV1A.0158s0480
Salix purpurea
SapurV1A.0158s0480
N
SapurV1A.0225s0240
Salix purpurea
SapurV1A.0225s0240
N
Sb06g017580
Sorghum bicolor
Sb06g017580
N
Si012297m.g
Setaria italica
Si012297m.g
N
Solyc01g103180.2
Solanum lycopersicum
Solyc01g103180.2
N
Solyc09g075640.2
Solanum lycopersicum
Solyc09g075640.2
N
TCM_021310
Theobroma cacao
TCM_021310
N
TCM_041141
Theobroma cacao
TCM_041141
N
Thhalv10006984m.g
Eutrema salsugineum
Thhalv10006984m.g
N
Traes_2AL_9A4A7514E
Triticum aestivum
Traes_2AL_9A4A7514E
N
Traes_2BL_C1DE13045
Triticum aestivum
Traes_2BL_C1DE13045
N
TRIUR3_11057
Triticum urartu
TRIUR3_11057
N
VIT_05s0077g01400
Vitis vinifera
VIT_05s0077g01400
N
VIT_07s0005g01120
Vitis vinifera
VIT_07s0005g01120
N
VIT_12s0035g01360
Vitis vinifera
VIT_12s0035g01360
N