CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J14631
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J14631
T298967_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J14631.1.p
NAC/NAM
8
124
PPGFHFFPSDEELIVHFLRRKASLLPCQPDIVPTILLNHYDPWELNDKALQAGNQWYFFSHATQSRVTPNGYWSSICADETVKSGGCNIGLKKTLVFSIGESSEGIETNWIMHEYHL
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA016453
Oryza indica
BGIOSGA016453
N
0.987
GRMZM2G316840
Zea mays
GRMZM2G316840
N
0.987
GSMUA_Achr6G17670_001
Musa acuminata
GSMUA_Achr6G17670_001
N
0.909
LPERR04G10110
Leersia perrieri
LPERR04G10110
N
0.905
OB04G20560
Oryza brachyantha
OB04G20560
N
0.895
OBART04G13350
Oryza barthii
OBART04G13350
N
0.987
OGLUM04G13190
Oryza glumaepatula
OGLUM04G13190
N
0.987
OLONG_015951
Oryza longistaminata
OLONG_015951
N
0.987
OMERI04G11960
Oryza meridionalis
OMERI04G11960
N
0.987
ONIVA04G11520
Oryza nivara
ONIVA04G11520
N
0.987
ORGLA04G0103800
Oryza glaberrima
ORGLA04G0103800
N
0.987
ORUFI04G14570
Oryza rufipogon
ORUFI04G14570
N
0.987
OS04G0437000
Oryza sativa
OS04G0437000
N
0.987
Pavir.Aa01694
Panicum virgatum
Pavir.Aa01694
N
0.890
Pavir.Ab01921
Panicum virgatum
Pavir.Ab01921
N
0.890
Pavir.Da00408
Panicum virgatum
Pavir.Da00408
N
0.886
Pavir.Ga01785
Panicum virgatum
Pavir.Ga01785
N
0.992
Pavir.J27766
Panicum virgatum
Pavir.J27766
N
0.886
Sb04g022672
Sorghum bicolor
Sb04g022672
N
0.888
Sb06g017190
Sorghum bicolor
Sb06g017190
N
0.993
Si011079m.g
Setaria italica
Si011079m.g
N
0.992
Si018368m.g
Setaria italica
Si018368m.g
N
0.883