CBG19870 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG19870 T301590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-46
M00692_2.00 		Caenorhabditis elegans
NNNDWNHRN
NYDNWHNNN		 PBM
Narasimhan et al.(2015)
pTH9924 		0.991 0.943
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG19870 Nuclear receptor 95 165

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005479 Calypte anna Aan_R005479 N
ACEP25970 Atta cephalotes ACEP25970 N
ACOM023832 Anopheles coluzzii ACOM023832 N
ANCCAN_16550 Ancylostoma caninum ANCCAN_16550 N
ARID5A Otolemur garnettii ENSOGAG00000004116 I
ARID5A Procavia capensis ENSPCAG00000006363 I
ARID5A Pan troglodytes ENSPTRG00000012234 I
Arid5a Mus musculus ENSMUSG00000037447 D
ARID5A Microcebus murinus ENSMICG00000001964 I
ARID5A Loxodonta africana ENSLAFG00000009162 I
ARID5A Gorilla gorilla ENSGGOG00000017068 I
ARID5A Homo sapiens ENSG00000196843 I
ARID5A Erinaceus europaeus ENSEEUG00000008247 I
Arid5a Dipodomys ordii ENSDORG00000002540 I
Arid5a Rattus norvegicus ENSRNOG00000015382 D
ARID5A Sus scrofa ENSSSCG00000008123 I
ARID5A Cavia porcellus ENSCPOG00000026444 I
ARID5A Callithrix jacchus ENSCJAG00000007759 I
ARID5A Bos taurus ENSBTAG00000014090 I
ARID5B Tursiops truncatus ENSTTRG00000009968 N
BOTBODRAFT_174219 Botryobasidium botryosum BOTBODRAFT_174219 N
BOTBODRAFT_182015 Botryobasidium botryosum BOTBODRAFT_182015 N
Bra015737 Brassica rapa Bra015737 N
CapteG108943 Capitella teleta CapteG108943 N
Cflo_11029--XP_001120115.1_APIME Camponotus floridanus Cflo_11029--XP_001120115.1_APIME N
ENSCJAG00000034027 Callithrix jacchus ENSCJAG00000034027 N
ENSCSAG00000017355 Chlorocebus sabaeus ENSCSAG00000017355 I
ENSCSAVG00000005880 Ciona savignyi ENSCSAVG00000005880 N
ENSNLEG00000007764 Nomascus leucogenys ENSNLEG00000007764 N
ENSOARG00000013883 Ovis aries ENSOARG00000013883 N
ENSPPYG00000012072 Pongo abelii ENSPPYG00000012072 I
evm.TU.supercontig_70.18 Carica papaya evm.TU.supercontig_70.18 N
e_gw1.8.356.1 Monosiga brevicollis e_gw1.8.356.1 N
GD20218 Drosophila simulans FBgn0191696 N
gene11760-v1.0-hybrid Fragaria vesca gene11760-v1.0-hybrid N
Genemark.397_g Heterobasidion annosum Genemark.397_g N
Genemark1.2983_g Coccomyxa subellipsoidea C169 Genemark1.2983_g N
Gfo_R015467 Geospiza fortis Gfo_R015467 N
GK21672 Drosophila willistoni FBgn0223657 N
GL12242 Drosophila persimilis FBgn0149849 N
gw1.8.90.1 Volvox carteri gw1.8.90.1 N
HCOI00647600 Haemonchus contortus HCOI00647600 N
HHAL003716-PA Halyomorpha halys HHAL003716-PA N
HPBE_0000220801 Heligmosomoides bakeri HPBE_0000220801 N
Hsal_11763--XP_001120115.1_APIME Harpegnathos saltator Hsal_11763--XP_001120115.1_APIME N
MCINX010724 Melitaea cinxia MCINX010724 N
MESCA003685 Megaselia scalaris MESCA003685 N
MLOC_7381 Hordeum vulgare MLOC_7381 N
NECAME_01264 Necator americanus NECAME_01264 N
OESDEN_17751 Oesophagostomum dentatum OESDEN_17751 N
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I
ORGLA07G0233500 Oryza glaberrima ORGLA07G0233500 N
Pavir.Da00612 Panicum virgatum Pavir.Da00612 N
Pavir.J25952 Panicum virgatum Pavir.J25952 N
PDK_20s1315202g001 Phoenix dactylifera PDK_20s1315202g001 N
PGSC0003DMG400047019 Solanum tuberosum PGSC0003DMG400047019 N
PHACADRAFT_251691 Phanerochaete carnosa PHACADRAFT_251691 N
PHUM027610 Pediculus humanus PHUM027610 N
Pvit_06674 Pogona vitticeps Pvit_06674 N
SBAD_0000429301 Soboliphyme baturini SBAD_0000429301 N
Sjc_0111140 Schistosoma japonicum Sjc_0111140 N
SMTD_0000131801 Schistosoma mattheei SMTD_0000131801 N
SMTD_0001549501 Schistosoma mattheei SMTD_0001549501 N
SPER_0000246801 Spirometra erinaceieuropaei SPER_0000246801 N
SPER_0003392901 Spirometra erinaceieuropaei SPER_0003392901 N
SPER_0003827801 Spirometra erinaceieuropaei SPER_0003827801 N
SPU_003500 Strongylocentrotus purpuratus SPU_003500 N
SROB_0001561301 Schistosoma rodhaini SROB_0001561301 N
SVUK_0000804601 Strongylus vulgaris SVUK_0000804601 N
TELCIR_22728 Teladorsagia circumcincta TELCIR_22728 N
TRE_0000846701 Trichobilharzia regenti TRE_0000846701 N
TRIUR3_29596 Triticum urartu TRIUR3_29596 N
YQE_11989 Dendroctonus ponderosae YQE_11989 N