CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN30611
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN30611
T301869_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN30611
Nuclear receptor
18
87
EQCVVCGDAADGFHYGVRSCRGCNAFFRRAVTFNMSFTCRRGGRCPVDKNARCACRACRLAKCYAVGMDK
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28779.m000140
Ricinus communis
28779.m000140
I
AT1G19490
Arabidopsis thaliana
AT1G19490
D
Bostr.7128s0552
Boechera stricta
Bostr.7128s0552
I
Cagra.1961s0053
Capsella grandiflora
Cagra.1961s0053
I
Carubv10011417m.g
Capsella rubella
Carubv10011417m.g
I
Ciclev10013541m.g
Citrus clementina
Ciclev10013541m.g
I
Cla017983
Citrullus lanatus
Cla017983
I
Cucsa.240980
Cucumis sativus
Cucsa.240980
I
gene30252-v1.0-hybrid
Fragaria vesca
gene30252-v1.0-hybrid
I
GLYMA03G35101
Glycine max
GLYMA03G35101
I
GLYMA19G37801
Glycine max
GLYMA19G37801
I
Gorai.009G405400
Gossypium raimondii
Gorai.009G405400
I
Lus10003255.g
Linum usitatissimum
Lus10003255.g
I
orange1.1g011345m.g
Citrus sinensis
orange1.1g011345m.g
I
POPTR_0006s11550
Populus trichocarpa
POPTR_0006s11550
I
PRUPE_ppa003901mg
Prunus persica
PRUPE_ppa003901mg
I
SapurV1A.0208s0130
Salix purpurea
SapurV1A.0208s0130
I
TCM_022516
Theobroma cacao
TCM_022516
I
Thhalv10009681m.g
Eutrema salsugineum
Thhalv10009681m.g
I
VIT_08s0007g03640
Vitis vinifera
VIT_08s0007g03640
I