AATE003142 (Anopheles atroparvus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 AATE003142 T307494_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.988 0.957
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.988 0.957
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.977 0.829
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.977 0.829
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.977 0.829
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.977 0.814
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.973 0.814
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.969 0.814
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.963 0.814
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AATE003142-PA Nuclear receptor 96 166

Links

Other Nuclear receptor family TFs
Other Anopheles atroparvus TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.000
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.000
Bo2g012170 Brassica oleracea Bo2g012170 I 0.000
Bo7g090950 Brassica oleracea Bo7g090950 I 0.000
Bo9g165670 Brassica oleracea Bo9g165670 I 0.000
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.000
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.000
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.000
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.000
Bra008740 Brassica rapa Bra008740 I 0.000
Bra023486 Brassica rapa Bra023486 I 0.000
Bra025311 Brassica rapa Bra025311 I 0.000
Bra025589 Brassica rapa Bra025589 I 0.000
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.000
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.000
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.000
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.000
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.000
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.000
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.000
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.000
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.000
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.000
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.000
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.000
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I 0.000
GL1 Arabidopsis thaliana AT3G27920 I 0.000
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.000
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.000
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.000
MDP0000578193 Malus domestica MDP0000578193 I 0.000
MDP0000650225 Malus domestica MDP0000650225 I 0.000
MYB23 Arabidopsis thaliana AT5G40330 D 0.000
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.000
Pm006678 Prunus mume Pm006678 I 0.000
Pm024725 Prunus mume Pm024725 I 0.000
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.000
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.000
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.000
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.000
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.000
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.000
TCM_012057 Theobroma cacao TCM_012057 I 0.000
TCM_016886 Theobroma cacao TCM_016886 I 0.000
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.000
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.000
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.000
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.000
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.000
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.000
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.000
WER Arabidopsis thaliana AT5G14750 D 0.000