CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf11243-snap-gene-0.6
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf11243-snap-gene-0.6
T309588_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf11243-snap-gene-0.6-mRNA-1
Nuclear receptor
7
89
KQCKVCGSKEKVCFHYGVCTCRACGAFFRRYLENENKCRYSECTYKCSQKQLLKENKGKKSETNLANCKKCRLEKCLSVGMKR
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP13085
Atta cephalotes
ACEP13085
I
BGIBMGA006230
Bombyx mori
BGIBMGA006230
I
CapteG76255
Capitella teleta
CapteG76255
I
Cflo_07707--XP_393944.1_APIME
Camponotus floridanus
Cflo_07707--XP_393944.1_APIME
I
CGI_10027813
Crassostrea gigas
CGI_10027813
I
CLEC007039
Cimex lectularius
CLEC007039
I
esg
Drosophila melanogaster
FBgn0001981
D
estExt_fgenesh2_kg.C_190001
Branchiostoma floridae
estExt_fgenesh2_kg.C_190001
I
GA17666
Drosophila pseudoobscura
FBgn0077676
I
GA17994
Drosophila pseudoobscura
FBgn0078003
I
GD21956
Drosophila simulans
FBgn0193371
I
GD24004
Drosophila simulans
FBgn0195364
I
GE19402
Drosophila yakuba
FBgn0236745
I
GE20968
Drosophila yakuba
FBgn0238253
I
GF14525
Drosophila ananassae
FBgn0091552
I
GF15382
Drosophila ananassae
FBgn0092407
I
GG24207
Drosophila erecta
FBgn0116339
I
GG25158
Drosophila erecta
FBgn0117283
I
GH13119
Drosophila grimshawi
FBgn0120596
I
GH13754
Drosophila grimshawi
FBgn0121230
I
GI17894
Drosophila mojavensis
FBgn0140635
I
GI22651
Drosophila mojavensis
FBgn0145379
I
GJ17399
Drosophila virilis
FBgn0204571
I
GJ23203
Drosophila virilis
FBgn0210305
I
GK18133
Drosophila willistoni
FBgn0220132
I
GK18253
Drosophila willistoni
FBgn0220252
I
GL26425
Drosophila persimilis
FBgn0164007
I
GL26594
Drosophila persimilis
FBgn0164176
I
GM14357
Drosophila sechellia
FBgn0169282
I
HHAL006775-PA
Halyomorpha halys
HHAL006775-PA
I
HMEL002306
Heliconius melpomene
HMEL002306
I
KGM_17970
Danaus plexippus
KGM_17970
I
L798_10614
Zootermopsis nevadensis
L798_10614
I
LCUP013268
Lucilia cuprina
LCUP013268
I
LDEC001157
Leptinotarsa decemlineata
LDEC001157
I
LotgiG114290
Lottia gigantea
LotgiG114290
I
MCINX001355
Melitaea cinxia
MCINX001355
I
MDOA014024
Musca domestica
MDOA014024
I
NV17743
Nasonia vitripennis
NV17743
I
PHUM091060
Pediculus humanus
PHUM091060
I
PPAI008011
Phlebotomus papatasi
PPAI008011
I
RPRC005707
Rhodnius prolixus
RPRC005707
I
Sakowv30043351m.g
Saccoglossus kowalevskii
Sakowv30043351m.g
I
SINV14155
Solenopsis invicta
SINV14155
I
SMAR001314
Strigamia maritima
SMAR001314
I
TC014474
Tribolium castaneum
TC014474
I
tetur13g00760
Tetranychus urticae
tetur13g00760
I
wor
Drosophila melanogaster
FBgn0001983
D