NBR_0001834701 (Nippostrongylus brasiliensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 NBR_0001834701 T309738_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.906 0.571
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.841 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0001834701-mRNA-1 Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Nippostrongylus brasiliensis TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28428.m000040 Ricinus communis 28428.m000040 I
30143.m001171 Ricinus communis 30143.m001171 N
Aquca_003_00139 Aquilegia coerulea Aquca_003_00139 N
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I
BGIOSGA011445 Oryza indica BGIOSGA011445 I
Bo4g108600 Brassica oleracea Bo4g108600 I
Bo8g092560 Brassica oleracea Bo8g092560 I
Bo9g176580 Brassica oleracea Bo9g176580 N
Bostr.13129s0366 Boechera stricta Bostr.13129s0366 N
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I
Bra009161 Brassica rapa Bra009161 N
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I
Cagra.2117s0054 Capsella grandiflora Cagra.2117s0054 N
Carubv10002921m.g Capsella rubella Carubv10002921m.g N
Carubv10019250m.g Capsella rubella Carubv10019250m.g I
cassava15468.m1 Manihot esculenta cassava15468.m1 I
cassava40664.m1 Manihot esculenta cassava40664.m1 I
cassava41632.m1 Manihot esculenta cassava41632.m1 I
Ca_07763 Cicer arietinum Ca_07763 I
Ca_12214 Cicer arietinum Ca_12214 I
Ca_16122 Cicer arietinum Ca_16122 N
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I
Ciclev10033354m.g Citrus clementina Ciclev10033354m.g I
Cla004059 Citrullus lanatus Cla004059 N
Cla006087 Citrullus lanatus Cla006087 I
Cla007068 Citrullus lanatus Cla007068 I
Cla021625 Citrullus lanatus Cla021625 I
Cucsa.053450 Cucumis sativus Cucsa.053450 I
Cucsa.165150 Cucumis sativus Cucsa.165150 N
Cucsa.362840 Cucumis sativus Cucsa.362840 I
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I
Eucgr.G02955 Eucalyptus grandis Eucgr.G02955 I
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I
gene26330-v1.0-hybrid Fragaria vesca gene26330-v1.0-hybrid N
GLYMA01G34540 Glycine max GLYMA01G34540 I
GLYMA02G41710 Glycine max GLYMA02G41710 N
GLYMA03G02620 Glycine max GLYMA03G02620 I
GLYMA03G31860 Glycine max GLYMA03G31860 I
GLYMA10G04050 Glycine max GLYMA10G04050 I
GLYMA13G18210 Glycine max GLYMA13G18210 I
GLYMA14G07260 Glycine max GLYMA14G07260 N
GLYMA19G34600 Glycine max GLYMA19G34600 I
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I
Gorai.011G267700 Gossypium raimondii Gorai.011G267700 I
GRMZM2G092542 Zea mays GRMZM2G092542 I
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I
LBD29 Arabidopsis thaliana AT3G58190 I
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I
LBD33 Arabidopsis lyrata Al_scaffold_0006_527 N
LBD33 Arabidopsis thaliana AT5G06080 N
LBD33 Vitis vinifera VIT_13s0019g02060 N
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I
LjSGA_054888.1 Lotus japonicus LjSGA_054888.1 I
LjT35F15.90.nd Lotus japonicus LjT35F15.90.nd I
LPERR03G03470 Leersia perrieri LPERR03G03470 I
Lus10000613.g Linum usitatissimum Lus10000613.g I
Lus10004707.g Linum usitatissimum Lus10004707.g N
Lus10033873.g Linum usitatissimum Lus10033873.g I
Lus10040274.g Linum usitatissimum Lus10040274.g N
MDP0000123797 Malus domestica MDP0000123797 N
MDP0000133936 Malus domestica MDP0000133936 N
mgf020558m Mimulus guttatus mgf020558m N
mgf020773m Mimulus guttatus mgf020773m I
MTR_1g070205 Medicago truncatula MTR_1g070205 I
MTR_5g080470 Medicago truncatula MTR_5g080470 N
MTR_7g096610 Medicago truncatula MTR_7g096610 I
OB03G13890 Oryza brachyantha OB03G13890 I
OBART03G03830 Oryza barthii OBART03G03830 I
OMERI07G01660 Oryza meridionalis OMERI07G01660 I
ONIVA03G03580 Oryza nivara ONIVA03G03580 I
OPUNC03G03520 Oryza punctata OPUNC03G03520 I
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I
OS03G0149100 Oryza sativa OS03G0149100 I
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I
Pm017936 Prunus mume Pm017936 I
Pm018835 Prunus mume Pm018835 N
Pm020627 Prunus mume Pm020627 I
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I
POPTR_0010s20800 Populus trichocarpa POPTR_0010s20800 I
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I
PRUPE_ppa018815mg Prunus persica PRUPE_ppa018815mg N
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I
SapurV1A.0281s0190 Salix purpurea SapurV1A.0281s0190 I
Sb01g046990 Sorghum bicolor Sb01g046990 I
Si040019m.g Setaria italica Si040019m.g I
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I
TCM_004103 Theobroma cacao TCM_004103 I
TCM_042730 Theobroma cacao TCM_042730 I
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I
Thhalv10015772m.g Eutrema salsugineum Thhalv10015772m.g N
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I