nLs.2.1.2.g07694 (Litomosoides sigmodontis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nLs.2.1.2.g07694 T309842_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
daf-12
M00685_2.00 		Caenorhabditis elegans
NDAGTRCANN
NNTGYACTHN		 PBM
Narasimhan et al.(2015)
pTH9108 		0.906 0.873
daf-12
M08159_2.00 		Caenorhabditis elegans
GWGYGYGYKTGYDKB
VMHRCAMRCRCRCWC		 ChIP-seq
Mathelier et al.(2014)
MA0538.1 		0.906 0.873
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t07694-RA Nuclear receptor 157 211

Links

Other Nuclear receptor family TFs
Other Litomosoides sigmodontis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OLONG_019354 Oryza longistaminata OLONG_019354 N
ORGLA02G0199200 Oryza glaberrima ORGLA02G0199200 N
Pavir.Ab02219 Panicum virgatum Pavir.Ab02219 N
Pavir.J28752 Panicum virgatum Pavir.J28752 N
Sb04g025195 Sorghum bicolor Sb04g025195 N