SVUK_0000955601 (Strongylus vulgaris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SVUK_0000955601 T310697_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.364 1.000
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0000955601-mRNA-1 Nuclear receptor 49 70

Links

Other Nuclear receptor family TFs
Other Strongylus vulgaris TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006375 Calypte anna Aan_R006375 I 0.000
Afo_R011359 Aptenodytes forsteri Afo_R011359 I 0.000
Brh_R000963 Buceros rhinoceros Brh_R000963 I 0.000
Cmyd_10008594 Chelonia mydas Cmyd_10008594 I 0.000
ENSAMEG00000018236 Ailuropoda melanoleuca ENSAMEG00000018236 I 0.000
ENSAPLG00000006795 Anas platyrhynchos ENSAPLG00000006795 I 0.000
ENSCSAG00000014415 Chlorocebus sabaeus ENSCSAG00000014415 I 0.000
ENSETEG00000002607 Echinops telfairi ENSETEG00000002607 I 0.000
ENSFALG00000011066 Ficedula albicollis ENSFALG00000011066 I 0.000
ENSLACG00000008544 Latimeria chalumnae ENSLACG00000008544 I 0.000
ENSLOCG00000016127 Lepisosteus oculatus ENSLOCG00000016127 I 0.000
ENSMMUP00000014199 Macaca fascicularis ENSMMUP00000014199 I 0.000
ENSMPUG00000005180 Mustela putorius furo ENSMPUG00000005180 I 0.000
ENSNLEG00000009519 Nomascus leucogenys ENSNLEG00000009519 I 0.000
ENSOARG00000001457 Ovis aries ENSOARG00000001457 I 0.000
ENSP00000295025-D1 Bos grunniens ENSP00000295025-D1 I 0.000
ENSPANG00000006148 Papio anubis ENSPANG00000006148 I 0.000
ENSPPYG00000012391 Pongo abelii ENSPPYG00000012391 I 0.000
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I 0.000
ENSSHAG00000014405 Sarcophilus harrisii ENSSHAG00000014405 I 0.000
ENSSTOG00000005785 Ictidomys tridecemlineatus ENSSTOG00000005785 I 0.000
ENSTSYG00000012918 Tarsius syrichta ENSTSYG00000012918 I 0.000
Gfo_R008165 Geospiza fortis Gfo_R008165 I 0.000
Myotis_brandtii_REL_10034307 Myotis brandtii Myotis_brandtii_REL_10034307 I 0.000
Pvit_04537 Pogona vitticeps Pvit_04537 I 0.000
REL Vicugna pacos ENSVPAG00000000493 I 0.000
REL Oryctolagus cuniculus ENSOCUG00000004968 I 0.000
REL Taeniopygia guttata ENSTGUG00000006743 I 0.000
REL Sorex araneus ENSSARG00000011809 I 0.000
rel Xenopus tropicalis XB-GENE-993262 I 0.000
Rel Rattus norvegicus ENSRNOG00000054437 I 0.000
REL Pteropus vampyrus ENSPVAG00000000364 I 0.000
REL Pan troglodytes ENSPTRG00000011949 I 0.000
rel Oryzias latipes ENSORLG00000001586 I 0.000
REL Bos taurus ENSBTAG00000015386 I 0.000
REL Canis familiaris ENSCAFG00000002981 I 0.000
REL Choloepus hoffmanni ENSCHOG00000010935 I 0.000
REL Callithrix jacchus ENSCJAG00000008975 I 0.000
REL Cavia porcellus ENSCPOG00000011659 I 0.000
REL Equus caballus ENSECAG00000003277 I 0.000
REL Felis catus ENSFCAG00000008018 I 0.000
REL Homo sapiens ENSG00000162924 D 0.000
REL Gallus gallus ENSGALG00000007845 I 0.000
REL Gorilla gorilla ENSGGOG00000024826 I 0.000
REL Loxodonta africana ENSLAFG00000013507 I 0.000
REL Meleagris gallopavo ENSMGAG00000001721 I 0.000
REL Microcebus murinus ENSMICG00000010062 I 0.000
REL Myotis lucifugus ENSMLUG00000007454 I 0.000
REL Macaca mulatta ENSMMUG00000010834 I 0.000
REL Monodelphis domestica ENSMODG00000002172 I 0.000
Rel Mus musculus ENSMUSG00000020275 D 0.000
REL Ornithorhynchus anatinus ENSOANG00000012405 I 0.000
REL Anolis carolinensis ENSACAG00000003030 I 0.000
REL Otolemur garnettii ENSOGAG00000013722 I 0.000
REL Procavia capensis ENSPCAG00000017047 I 0.000
rel.L Xenopus laevis XB-GENE-993266 I 0.000
rel.S Xenopus laevis XB-GENE-17342653 I 0.000
Tal_R005829 Tyto alba Tal_R005829 I 0.000