PAX1 (Ornithorhynchus anatinus)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 ENSOANG00000002008 T311716_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.992 0.992
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.992 0.992
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.992 0.992
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.992 0.992
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.968 0.968
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.968 0.968
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.968 0.968
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.944 0.944
Poxm
M03944_2.00 		Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG		 SELEX
Nitta et al.(2015)
Poxm_1 		0.880 0.880
Poxm
M03945_2.00 		Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN		 SELEX
Nitta et al.(2015)
Poxm_2 		0.880 0.880
Poxm
M06436_2.00 		Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN		 B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129 		0.880 0.880
PAX7
M00346_2.00 		Homo sapiens
NGTYAYGSHN
NDSCRTRACN		 PBM
Barrera et al.(2016)
PAX7_REF 		0.752 0.752
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.744 0.744
PAX7
M00345_2.00 		Homo sapiens
NSGTCACGSN
NSCGTGACSN		 PBM
Barrera et al.(2016)
PAX7_P112L 		0.744 0.744
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.736 0.736
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.736 0.736
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.736 0.736
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.736 0.736
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.736 0.736
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.736 0.736
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.736 0.736
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.736 0.736
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.736 0.736
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.736 0.736
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.736 0.736
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.736 0.736
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.736 0.736
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.736 0.736
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.736 0.736
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.736 0.736
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.736 0.736
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.736 0.736
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.736 0.736
PAX8
M05685_2.00 		Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX 		0.728 0.728
Pax8
M09624_2.00 		Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV		 Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938 		0.728 0.728
PAX8
M11205_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_01 		0.728 0.728
PAX8
M11206_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_B 		0.728 0.728
PAX8
M05686_2.00 		Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX 		0.728 0.728
sv
M01302_2.00 		Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN		 PBM
Lambert et al.(2019)
pTH9773 		0.712 0.712
sv
M03949_2.00 		Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN		 SELEX
Nitta et al.(2015)
sv_1 		0.712 0.712
sv
M06438_2.00 		Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY		 B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000003185 Paired box 4 128

Links

Other Paired box family TFs
Other Ornithorhynchus anatinus TFs

520 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003602 Aedes aegypti AAEL003602 N
AALB005765 Anopheles albimanus AALB005765 N
AARA007771 Anopheles arabiensis AARA007771 N
AATE006171 Anopheles atroparvus AATE006171 N
ACEP12467 Atta cephalotes ACEP12467 N
ACHR001790 Anopheles christyi ACHR001790 N
ACUA006984 Anopheles culicifacies ACUA006984 N
ACYPI007962 Acyrthosiphon pisum ACYPI007962 N
ADIR008055 Anopheles dirus ADIR008055 N
AEPI001699 Anopheles epiroticus AEPI001699 N
AFAF012484 Anopheles farauti AFAF012484 N
AFUN008026 Anopheles funestus AFUN008026 N
AGAP007109 Anopheles gambiae AGAP007109 N
AMAM024265 Anopheles maculatus AMAM024265 N
AMEC009079 Anopheles melas AMEC009079 N
AMEC019433 Anopheles melas AMEC019433 N
AMEM014597 Anopheles merus AMEM014597 N
AMIN011248 Anopheles minimus AMIN011248 N
AQUA002036 Anopheles quadriannulatus AQUA002036 N
ASIS021384 Anopheles sinensis ASIS021384 N
ASTEI06883 Anopheles stephensi ASTEI06883 N
BGIBMGA012741 Bombyx mori BGIBMGA012741 N
CapteG221467 Capitella teleta CapteG221467 N
Cflo_02233--XP_001120809.1_APIME Camponotus floridanus Cflo_02233--XP_001120809.1_APIME N
CG13287 Drosophila melanogaster FBgn0035643 N
CLEC010738 Cimex lectularius CLEC010738 N
CPIJ004963 Culex quinquefasciatus CPIJ004963 N
CpipJ_CPIJ004963 Culex pipiens CpipJ_CPIJ004963 N
DAPPUDRAFT_28712 Daphnia pulex DAPPUDRAFT_28712 N
ENSAMXG00000020060 Astyanax mexicanus ENSAMXG00000020060 N
ENSCSAG00000004478 Chlorocebus sabaeus ENSCSAG00000004478 N
ENSECAG00000017767 Equus caballus ENSECAG00000017767 N
ENSFCAG00000026794 Felis catus ENSFCAG00000026794 N
ENSGALG00000026560 Gallus gallus ENSGALG00000026560 N
ENSLACG00000001866 Latimeria chalumnae ENSLACG00000001866 N
ENSLOCG00000007226 Lepisosteus oculatus ENSLOCG00000007226 N
ENSMEUG00000015872 Macropus eugenii ENSMEUG00000015872 N
ENSMPUG00000006558 Mustela putorius furo ENSMPUG00000006558 N
ENSNLEG00000008504 Nomascus leucogenys ENSNLEG00000008504 N
ENSOARG00000018972 Ovis aries ENSOARG00000018972 N
ENSOGAG00000026262 Otolemur garnettii ENSOGAG00000026262 N
ENSONIG00000014038 Oreochromis niloticus ENSONIG00000014038 N
ENSP00000406998 Macaca fascicularis ENSP00000406998 N
ENSPANG00000024349 Papio anubis ENSPANG00000024349 N
ENSPFOG00000011716 Poecilia formosa ENSPFOG00000011716 N
ENSPMAG00000005756 Petromyzon marinus ENSPMAG00000005756 N
ENSPPYG00000014879 Pongo abelii ENSPPYG00000014879 N
ENSSHAG00000018147 Sarcophilus harrisii ENSSHAG00000018147 N
ENSSTOG00000015688 Ictidomys tridecemlineatus ENSSTOG00000015688 N
ENSXMAG00000009993 Xiphophorus maculatus ENSXMAG00000009993 N
GA12173 Drosophila pseudoobscura FBgn0072221 N
GB51047 Apis mellifera GB51047 N
GD13907 Drosophila simulans FBgn0185603 N
GE21517 Drosophila yakuba FBgn0238774 N
GF23998 Drosophila ananassae FBgn0100992 N
GG15296 Drosophila erecta FBgn0107548 N
GH14523 Drosophila grimshawi FBgn0121999 N
GH25273 Drosophila grimshawi FBgn0132728 N
GI13299 Drosophila mojavensis FBgn0136056 N
GJ12068 Drosophila virilis FBgn0199320 N
GK16660 Drosophila willistoni FBgn0218662 N
GL21034 Drosophila persimilis FBgn0158629 N
GM14727 Drosophila sechellia FBgn0169648 N
HHAL003310-PA Halyomorpha halys HHAL003310-PA N
HMEL017852 Heliconius melpomene HMEL017852 N
Hsal_04139--XP_001120809.1_APIME Harpegnathos saltator Hsal_04139--XP_001120809.1_APIME N
ISCW009928 Ixodes scapularis ISCW009928 N
KGM_11907 Danaus plexippus KGM_11907 N
L798_05037 Zootermopsis nevadensis L798_05037 N
LCUP008185 Lucilia cuprina LCUP008185 N
LDEC001191 Leptinotarsa decemlineata LDEC001191 N
LotgiG69958 Lottia gigantea LotgiG69958 N
MCINX010301 Melitaea cinxia MCINX010301 N
MDOA007546 Musca domestica MDOA007546 N
NV17890 Nasonia vitripennis NV17890 N
Ocbimv22006527m.g Octopus bimaculoides Ocbimv22006527m.g N
Ogr08710 Ophisaurus gracilis Ogr08710 N
PHUM271650 Pediculus humanus PHUM271650 N
PRDM8 Anolis carolinensis ENSACAG00000010106 N
PRDM8 Canis familiaris ENSCAFG00000008881 N
PRDM8 Callithrix jacchus ENSCJAG00000015064 N
PRDM8 Cavia porcellus ENSCPOG00000019738 N
PRDM8 Dasypus novemcinctus ENSDNOG00000011667 N
PRDM8 Homo sapiens ENSG00000152784 N
PRDM8 Gorilla gorilla ENSGGOG00000007501 N
PRDM8 Myotis lucifugus ENSMLUG00000030190 N
PRDM8 Macaca mulatta ENSMMUG00000003338 N
PRDM8 Monodelphis domestica ENSMODG00000020789 N
Prdm8 Mus musculus ENSMUSG00000035456 N
PRDM8 Procavia capensis ENSPCAG00000001081 N
Prdm8 Rattus norvegicus ENSRNOG00000002004 N
PRDM8 Sorex araneus ENSSARG00000009823 N
PRDM8 Tupaia belangeri ENSTBEG00000006138 N
prdm8 Xenopus tropicalis XB-GENE-984391 N
prdm8b Danio rerio ENSDARG00000054683 N
prdm8b Oryzias latipes ENSORLG00000017786 N
prdm8b Tetraodon nigroviridis ENSTNIG00000016712 N
prdm8b Takifugu rubripes ENSTRUG00000001003 N
Pvit_15291 Pogona vitticeps Pvit_15291 N
SINV25005 Solenopsis invicta SINV25005 N
SMAR006435 Strigamia maritima SMAR006435 N
TC013073 Tribolium castaneum TC013073 N
tetur11g03890 Tetranychus urticae tetur11g03890 N