CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFUN002668
(
Anopheles funestus
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
AFUN002668
T312398_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PAX7
M00346_2.00
Homo sapiens
NGTYAYGSHN
NDSCRTRACN
PBM
Barrera et al.(2016)
PAX7_REF
0.838
0.838
PAX7
M00345_2.00
Homo sapiens
NSGTCACGSN
NSCGTGACSN
PBM
Barrera et al.(2016)
PAX7_P112L
0.829
0.829
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN
NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.714
0.714
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.714
0.714
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.714
0.714
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.714
0.714
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.714
0.714
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.714
0.714
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.714
0.714
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.714
0.714
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.714
0.714
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG
CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.714
0.714
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.714
0.714
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.714
0.714
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.714
0.714
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.714
0.714
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.714
0.714
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.714
0.714
PAX5
M11210_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.714
0.714
PAX5
M11211_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.714
0.714
PAX5
M11212_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.714
0.714
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR
YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.705
0.705
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFUN002668-PA
Paired box
22
126
GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPKVATPEVEARIEEMKKMNPGIFSWEIREKLIK
Links
Other
Paired box
family TFs
Other
Anopheles funestus
TFs
78 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
17440_YML027W
Saccharomyces paradoxus
17440_YML027W
I
A1O1_06861
Capronia coronata
A1O1_06861
I
A1O3_10315
Capronia epimyces
A1O3_10315
I
A1O5_07631
Cladophialophora psammophila
A1O5_07631
I
A1O7_09958
Cladophialophora yegresii
A1O7_09958
I
A1O9_06349
Exophiala aquamarina
A1O9_06349
I
AACERI_AaceriAER314W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAER314W
I
AB00260.1
Alternaria brassicicola
AB00260.1
I
ACLA_040020
Aspergillus clavatus
CADACLAG00003199
I
ACRE_069570
Acremonium chrysogenum
ACRE_069570
I
AGOS_AER314W
Ashbya gossypii
AGOS_AER314W
I
AOL_s00075g18
Arthrobotrys oligospora
AOL_s00075g18
I
ATEG_04171
Aspergillus terreus
CADATEAG00009984
D
AUEXF2481DRAFT_40998
Aureobasidium subglaciale
AUEXF2481DRAFT_40998
I
BBA_00148
Beauveria bassiana
BBA_00148
I
BDDG_04023
Blastomyces dermatitidis
BDDG_04023
I
BN7_6497
Wickerhamomyces ciferrii
BN7_6497
I
CADAFLAG00002414
Aspergillus flavus
CADAFLAG00002414
I
CADANGAG00002342
Aspergillus niger
CADANGAG00002342
I
CADAORAG00001369
Aspergillus oryzae
CADAORAG00001369
I
CAGL0G07249g
Candida glabrata
CAGL0G07249g
I
CANTEDRAFT_113041
Candida tenuis
CANTEDRAFT_113041
I
CaO19.7017
Candida albicans
CaO19.7017
I
CCM_06184
Cordyceps militaris
CCM_06184
I
CD36_70900
Candida dubliniensis
CD36_70900
I
CFIO01_01433
Colletotrichum fioriniae
CFIO01_01433
I
CGGC5_5664
Colletotrichum gloeosporioides
CGGC5_5664
I
CH063_05074
Colletotrichum higginsianum
CH063_05074
I
CIMG_09634
Coccidioides immitis
CIMG_09634
I
CLUG_04271
Candida lusitaniae
CLUG_04271
I
CLUG_04271
Clavispora lusitaniae
CLUG_04271
I
Cob_03876
Colletotrichum orbiculare
Cob_03876
I
COCC4DRAFT_127765
Bipolaris maydis
COCC4DRAFT_127765
I
COCCADRAFT_90442
Bipolaris zeicola
COCCADRAFT_90442
I
COCMIDRAFT_2266
Bipolaris oryzae
COCMIDRAFT_2266
I
COCSADRAFT_125307
Bipolaris sorokiniana
COCSADRAFT_125307
I
COCVIDRAFT_88516
Bipolaris victoriae
COCVIDRAFT_88516
I
CORT_0H00310
Candida orthopsilosis
CORT_0H00310
I
CPAG_00635
Candida parapsilosis
CPAG_00635
I
CPC735_023880
Coccidioides posadasii
CPC735_023880
I
CPUR_03335
Claviceps purpurea
CPUR_03335
I
CSUB01_02498
Colletotrichum sublineola
CSUB01_02498
I
CTRG_04888
Candida tropicalis
CTRG_04888
I
DEHA2F22286g
Debaryomyces hansenii
DEHA2F22286g
I
DOTSEDRAFT_142040
Dothistroma septosporum
DOTSEDRAFT_142040
I
DRE_07453
Drechslerella stenobrocha
DRE_07453
I
Ecym_4103
Eremothecium cymbalariae
Ecym_4103
I
EPUS_07220
Endocarpon pusillum
EPUS_07220
I
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273
I
estExt_fgenesh1_pm.C_chr_5.10316
Pichia stipitis
estExt_fgenesh1_pm.C_chr_5.10316
I
estExt_fgenesh3_pm.C_70282
Neurospora discreta
estExt_fgenesh3_pm.C_70282
I
estExt_Genewise1.C_11468
Cochliobolus heterostrophus C5
estExt_Genewise1.C_11468
I
EURHEDRAFT_516147
Aspergillus ruber
EURHEDRAFT_516147
I
FFUJ_01281
Fusarium fujikuroi
FFUJ_01281
I
fgenesh1_pm.00866_#_491
Aspergillus carbonarius
fgenesh1_pm.00866_#_491
I
fgenesh1_pm.C_scaffold_5000435
Cryphonectria parasitica
fgenesh1_pm.C_scaffold_5000435
I
FGRRES_01100
Fusarium graminearum
FGRRES_01100
D
FOXG_00297
Fusarium oxysporum
FOXG_00297
I
FPSE_09056
Fusarium pseudograminearum
FPSE_09056
I
FVEG_01221
Fusarium verticillioides
FVEG_01221
I
G210_2310
Candida maltosa
G210_2310
I
G647_08323
Cladophialophora carrionii
G647_08323
I
GLRG_04370
Colletotrichum graminicola
GLRG_04370
I
GMDG_01589
Pseudogymnoascus destructans
GMDG_01589
I
GNLVRS01_PISO0M03048g
Millerozyma farinosa
GNLVRS01_PISO0M03048g
I
GNLVRS01_PISO0N03203g
Millerozyma farinosa
GNLVRS01_PISO0N03203g
I
GSTUM_00011138001
Tuber melanosporum
GSTUM_00011138001
I
H072_1197
Dactylellina haptotyla
H072_1197
I
H101_06850
Trichophyton interdigitale
H101_06850
I
H102_08770
Trichophyton rubrum
H102_08770
I
H105_08795
Trichophyton soudanense
H105_08795
I
HCBG_03004
Histoplasma capsulatum
HCBG_03004
I
HMPREF1120_01778
Exophiala dermatitidis
HMPREF1120_01778
I
HMPREF1541_02811
Cyphellophora europaea
HMPREF1541_02811
I
HMPREF1624_00506
Sporothrix schenckii
HMPREF1624_00506
I
HPODL_02118
Ogataea parapolymorpha
HPODL_02118
I
J056_000182
Wallemia ichthyophaga
J056_000182
I
JL09_g4323
Pichia kudriavzevii
JL09_g4323
I
KAFR_0C05600
Kazachstania africana
KAFR_0C05600
I
KLLA0_B01584g
Kluyveromyces lactis
KLLA0_B01584g
I
KLTH0G04686g
Lachancea thermotolerans
KLTH0G04686g
I
KLTH0G04686g
Kluyveromyces thermotolerans
KLTH0G04686g
I
KNAG_0B03460
Kazachstania naganishii
KNAG_0B03460
I
Kpol_1004p50
Vanderwaltozyma polyspora
Kpol_1004p50
I
Kpol_1023p80
Vanderwaltozyma polyspora
Kpol_1023p80
I
KUCA_T00000773001
Kuraishia capsulata
KUCA_T00000773001
I
Kwal_18450
Kluyveromyces waltii
Kwal_18450
I
LALA0_S09e00364g
Lachancea lanzarotensis
LALA0_S09e00364g
I
LELG_05443
Lodderomyces elongisporus
LELG_05443
I
LEMA_P079180.1
Leptosphaeria maculans
LEMA_P079180.1
I
M407DRAFT_21315
Tulasnella calospora
M407DRAFT_21315
I
M437DRAFT_82573
Aureobasidium melanogenum
M437DRAFT_82573
I
M438DRAFT_345498
Aureobasidium pullulans
M438DRAFT_345498
I
MAC_05257
Metarhizium acridum
MAC_05257
I
MAJ_02218
Metarhizium majus
MAJ_02218
I
MAM_06825
Metarhizium album
MAM_06825
I
MANI_109748
Metarhizium anisopliae
MANI_109748
I
MBR_03692
Metarhizium brunneum
MBR_03692
I
MCYG_03024
Microsporum canis
MCYG_03024
I
MGG_11712
Magnaporthe oryzae
MGG_11712
I
MGU_04884
Metarhizium guizhouense
MGU_04884
I
MGYG_00197
Microsporum gypseum
MGYG_00197
I
MPH_01872
Macrophomina phaseolina
MPH_01872
I
NCAS_0H02770
Naumovozyma castellii
NCAS_0H02770
I
NCU03266
Neurospora crassa
NCU03266
D
NechaG98757
Fusarium solani
NechaG98757
I
NEUTE1DRAFT_133183
Neurospora tetrasperma
NEUTE1DRAFT_133183
I
PAAG_11867
Paracoccidioides sp lutzii
PAAG_11867
I
PABG_04211
Paracoccidioides brasiliensis
PABG_04211
I
PCH_Pc18g00190
Penicillium rubens
PCH_Pc18g00190
I
PDE_04931
Penicillium oxalicum
PDE_04931
I
PDIP_75510
Penicillium digitatum
PDIP_75510
I
PEX1_077160
Penicillium expansum
PEX1_077160
I
PFICI_01897
Pestalotiopsis fici
PFICI_01897
I
PGUG_00382
Candida guilliermondii
PGUG_00382
I
PGUG_00382
Meyerozyma guilliermondii
PGUG_00382
I
PICST_65833
Scheffersomyces stipitis
PICST_65833
I
PITC_036250
Penicillium italicum
PITC_036250
I
PMAA_076490
Talaromyces marneffei
PMAA_076490
I
PMAA_076490
Penicillium marneffei
PMAA_076490
I
PODANS_1_2230
Podospora anserina
PODANS_1_2230
I
PV04_10601
Capronia semiimmersa
PV04_10601
I
PV05_02773
Exophiala xenobiotica
PV05_02773
I
PV06_07195
Exophiala oligosperma
PV06_07195
I
PV07_12240
Cladophialophora immunda
PV07_12240
I
PV08_06661
Exophiala spinifera
PV08_06661
I
PV09_05311
Verruconis gallopava
PV09_05311
I
PV10_01019
Exophiala mesophila
PV10_01019
I
PV11_06012
Exophiala sideris
PV11_06012
I
PVAR5_3236
Byssochlamys spectabilis
PVAR5_3236
I
S40285_01877
Stachybotrys chlorohalonata
S40285_01877
I
S40288_08800
Stachybotrys chartarum
S40288_08800
I
SAKL0G05896g
Lachancea kluyveri
SAKL0G05896g
I
Scas_Contig641.12
Saccharomyces castellii
Scas_Contig641.12
I
SETTUDRAFT_126230
Setosphaeria turcica
SETTUDRAFT_126230
I
SMAC_02983
Sordaria macrospora
SMAC_02983
I
SNOG_10542
Stagonospora nodorum
SNOG_10542
I
SNOG_10542
Phaeosphaeria nodorum
SNOG_10542
I
SPAPADRAFT_57590
Spathaspora passalidarum
SPAPADRAFT_57590
I
SPBR_06725
Sporothrix brasiliensis
SPBR_06725
I
SU7_2475
Saccharomyces arboricola
SU7_2475
I
TBLA_0E02960
Tetrapisispora blattae
TBLA_0E02960
I
TDEL_0A04320
Torulaspora delbrueckii
TDEL_0A04320
I
TEQG_06412
Trichophyton equinum
TEQG_06412
I
TESG_00798
Trichophyton tonsurans
TESG_00798
I
THITE_2131584
Thielavia terrestris
THITE_2131584
I
TPHA_0D02630
Tetrapisispora phaffii
TPHA_0D02630
I
TRIREDRAFT_57059
Trichoderma reesei
TRIREDRAFT_57059
I
TRIVIDRAFT_42882
Trichoderma virens
TRIVIDRAFT_42882
I
TSTA_096850
Talaromyces stipitatus
TSTA_096850
I
U727_00433932271
Penicillium solitum
U727_00433932271
I
UREG_04594
Uncinocarpus reesii
UREG_04594
I
UV8b_5567
Ustilaginoidea virens
UV8b_5567
I
V499_00333
Pseudogymnoascus pannorum
V499_00333
I
VDAG_03007
Verticillium dahliae
VDAG_03007
I
VDBG_05845
Verticillium albo atrum
VDBG_05845
I
VDBG_05845
Verticillium alfalfae
VDBG_05845
I
X797_003774
Metarhizium robertsii
X797_003774
I
YALI0_E20449g
Yarrowia lipolytica
YALI0_E20449g
I
YOX1
Saccharomyces cerevisiae
YML027W
D
Z517_12283
Fonsecaea pedrosoi
Z517_12283
I
Z518_06261
Rhinocladiella mackenziei
Z518_06261
I
Z519_06193
Cladophialophora bantiana
Z519_06193
I
ZBAI_03698
Zygosaccharomyces bailii
ZBAI_03698
I
ZBAI_09382
Zygosaccharomyces bailii
ZBAI_09382
I
ZYRO0D13596g
Zygosaccharomyces rouxii
ZYRO0D13596g
I