CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf01187-augustus-gene-0.14
(
Meloidogyne floridensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
maker-nMf.1.1.scaf01187-augustus-gene-0.14
T312780_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf01187-augustus-gene-0.14-mRNA-1
Paired box
212
333
RSSGVNQLGRTYSPGLPLSMSERQQIVDLHKSGWKICDISKCLCITHSCVSKILQRYRTTGSVRPKDAKEGRQESPLVAAIRDYRTRLGIVRQSEIREQLIRDGLCRRENAPSRSSINHILR
Links
Other
Paired box
family TFs
Other
Meloidogyne floridensis
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000909601
Angiostrongylus costaricensis
ACOC_0000909601
N
0.805
ALUE_0000006201
Ascaris lumbricoides
ALUE_0000006201
N
0.778
ASIM_0001061401
Anisakis simplex
ASIM_0001061401
N
0.844
ASU_13814
Ascaris suum
ASU_13814
N
0.869
Bm4196
Brugia malayi
Bm4196
N
0.852
BTMF_0001047601
Brugia timori
BTMF_0001047601
N
0.800
BTMF_0001685601
Brugia timori
BTMF_0001685601
N
0.788
CBG14076
Caenorhabditis briggsae
CBG14076
N
0.820
CBN28426
Caenorhabditis brenneri
CBN28426
N
0.828
CJA16887
Caenorhabditis japonica
CJA16887
N
0.820
CRE00936
Caenorhabditis remanei
CRE00936
N
0.820
DICVIV_06612
Dictyocaulus viviparus
DICVIV_06612
N
0.803
EVEC_0001355301
Enterobius vermicularis
EVEC_0001355301
N
0.836
HPLM_0000886801
Haemonchus placei
HPLM_0000886801
N
0.807
L596_g148
Steinernema carpocapsae
L596_g148
N
0.770
L889_g31190
Steinernema feltiae
L889_g31190
N
0.770
L892_g12859
Steinernema scapterisci
L892_g12859
N
0.770
L893_g14515
Steinernema glaseri
L893_g14515
N
0.770
L898_g33187
Steinernema monticolum
L898_g33187
N
0.779
LOAG_16508
Loa loa
LOAG_16508
N
0.849
nAv.1.0.1.g08576
Acanthocheilonema viteae
nAv.1.0.1.g08576
N
0.849
nDi.2.2.2.g00913
Dirofilaria immitis
nDi.2.2.2.g00913
N
0.869
nLs.2.1.2.g06387
Litomosoides sigmodontis
nLs.2.1.2.g06387
N
0.840
nOo.2.0.1.g07401
Onchocerca ochengi
nOo.2.0.1.g07401
N
0.836
npax-2
Caenorhabditis elegans
WBGene00018591
N
0.820
OFLC_0000734201
Onchocerca flexuosa
OFLC_0000734201
N
0.806
Ppa-npax-4
Pristionchus pacificus
PPA03062
N
0.796
RSKR_0000509700
Rhabditophanes kr3021
RSKR_0000509700
N
0.746
scaffold1066-EXSNAP2012.3
Pristionchus exspectatus
scaffold1066-EXSNAP2012.3
N
0.794
SMUV_0000429701
Syphacia muris
SMUV_0000429701
N
0.803
SPAL_0000243500
Strongyloides papillosus
SPAL_0000243500
N
0.746
SSTP_0000993700
Strongyloides stercoralis
SSTP_0000993700
N
0.746
SVE_0001100
Strongyloides venezuelensis
SVE_0001100
N
0.738
TCLT_0000997101
Thelazia callipaeda
TCLT_0000997101
N
0.857
TCNE_0000151101
Toxocara canis
TCNE_0000151101
N
0.787
TCNE_0000252101
Toxocara canis
TCNE_0000252101
N
0.825
WBGene00239907
Onchocerca volvulus
WBGene00239907
N
0.861
WUBG_05014
Wuchereria bancrofti
WUBG_05014
N
0.840