ENSGACG00000007469 (Gasterosteus aculeatus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSGACG00000007469 T313556_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGACG00000007469
M02432_2.00		 Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN		 PBM
Weirauch et al.(2014)
pTH9179		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.864 0.864
ENSORLG00000007805
M02435_2.00 		Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277 		0.864 0.864
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		0.841 0.841
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.841 0.841
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.795 0.795
For this family, TFs with SR scores > 0.778 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02432_2.00 Pipsqueak 52 96

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000009917 Pipsqueak 494 538

Links

Other Pipsqueak family TFs
Other Gasterosteus aculeatus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB000386 Anopheles albimanus AALB000386 N
AARA012000 Anopheles arabiensis AARA012000 N
AATE011564 Anopheles atroparvus AATE011564 N
ACEP20262 Atta cephalotes ACEP20262 N
ACHR001520 Anopheles christyi ACHR001520 N
ACOM030990 Anopheles coluzzii ACOM030990 N
ACUA016707 Anopheles culicifacies ACUA016707 N
ADAC009616 Anopheles darlingi ADAC009616 N
ADIR000731 Anopheles dirus ADIR000731 N
AEPI000371 Anopheles epiroticus AEPI000371 N
AFAF013524 Anopheles farauti AFAF013524 N
AFUN009855 Anopheles funestus AFUN009855 N
AGAP007801 Anopheles gambiae AGAP007801 N
AMAM005791 Anopheles maculatus AMAM005791 N
AMEC005720 Anopheles melas AMEC005720 N
AMEM004251 Anopheles merus AMEM004251 N
AMIN006391 Anopheles minimus AMIN006391 N
AQUA003661 Anopheles quadriannulatus AQUA003661 N
ASTEI01654 Anopheles stephensi ASTEI01654 N
BGIBMGA013421 Bombyx mori BGIBMGA013421 N
Cflo_07829--XP_393735.3_APIME Camponotus floridanus Cflo_07829--XP_393735.3_APIME N
CPIJ016941 Culex quinquefasciatus CPIJ016941 N
CpipJ_CPIJ016941 Culex pipiens CpipJ_CPIJ016941 N
GA12711 Drosophila pseudoobscura FBgn0072757 N
GB44976 Apis mellifera GB44976 N
GH13383 Drosophila grimshawi FBgn0120859 N
GI17625 Drosophila mojavensis FBgn0140369 N
GJ17539 Drosophila virilis FBgn0204709 N
GK24157 Drosophila willistoni FBgn0226119 N
GL19569 Drosophila persimilis FBgn0157167 N
HMEL016601 Heliconius melpomene HMEL016601 N
LCUP005662 Lucilia cuprina LCUP005662 N
LDEC011960 Leptinotarsa decemlineata LDEC011960 N
LLOJ007416 Lutzomyia longipalpis LLOJ007416 N
MCINX006210 Melitaea cinxia MCINX006210 N
MDOA013595 Musca domestica MDOA013595 N
MESCA004747 Megaselia scalaris MESCA004747 N
NV10599 Nasonia vitripennis NV10599 N
SINV19899 Solenopsis invicta SINV19899 N
TC001609 Tribolium castaneum TC001609 N