ENSSHAG00000018667 (Sarcophilus harrisii)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSSHAG00000018667 T313617_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		1.000 1.000
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.956 0.956
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.956 0.956
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.911 0.911
ENSGACG00000007469
M02432_2.00 		Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN		 PBM
Weirauch et al.(2014)
pTH9179 		0.822 0.822
ENSORLG00000007805
M02435_2.00 		Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277 		0.822 0.822
LCORL
M02431_2.00 		Choloepus hoffmanni
NNYNAAHNN
NNDTTNRNN		 PBM
Weirauch et al.(2014)
pTH9253 		0.800 0.800
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000022054 Pipsqueak 350 395

Links

Other Pipsqueak family TFs
Other Sarcophilus harrisii TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02725 Capronia coronata A1O1_02725 N
BAUCODRAFT_152155 Baudoinia compniacensis BAUCODRAFT_152155 N
fgeneshPB_pg.5__382 Phycomyces blakesleeanus fgeneshPB_pg.5__382 N
G647_07147 Cladophialophora carrionii G647_07147 N
HMPREF1120_01263 Exophiala dermatitidis HMPREF1120_01263 N
PV04_08708 Capronia semiimmersa PV04_08708 N
PV05_00707 Exophiala xenobiotica PV05_00707 N
PV06_05029 Exophiala oligosperma PV06_05029 N
PV08_09166 Exophiala spinifera PV08_09166 N
PV11_02832 Exophiala sideris PV11_02832 N
SEPMUDRAFT_120402 Sphaerulina musiva SEPMUDRAFT_120402 N
Z518_05271 Rhinocladiella mackenziei Z518_05271 N