TCM_011266 (Theobroma cacao)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 TCM_011266 T315754_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G01818
M07247_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT2G01818_col_a 		0.718 0.718
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY01339 PLATZ 65 142

Links

Other PLATZ family TFs
Other Theobroma cacao TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29968.m000644 Ricinus communis 29968.m000644 I 0.910
AT2G01818 Arabidopsis thaliana AT2G01818 D 0.718
Bo7g078820 Brassica oleracea Bo7g078820 I 0.718
Bostr.0556s0005 Boechera stricta Bostr.0556s0005 I 0.731
Cagra.2235s0037 Capsella grandiflora Cagra.2235s0037 I 0.731
Carubv10017978m.g Capsella rubella Carubv10017978m.g I 0.731
cassava20325.m1 Manihot esculenta cassava20325.m1 I 0.872
cassava40347.m1 Manihot esculenta cassava40347.m1 N 0.756
Ciclev10016611m.g Citrus clementina Ciclev10016611m.g N 0.885
Cla005897 Citrullus lanatus Cla005897 N 0.795
Cucsa.012070 Cucumis sativus Cucsa.012070 N 0.795
Eucgr.G02080 Eucalyptus grandis Eucgr.G02080 I 0.885
evm.TU.supercontig_2.160 Carica papaya evm.TU.supercontig_2.160 I 0.872
fgenesh2_kg.5__89__AT2G01818.1 Arabidopsis lyrata fgenesh2_kg.5__89__AT2G01818.1 I 0.731
Gorai.005G152700 Gossypium raimondii Gorai.005G152700 I 0.974
Gorai.008G170500 Gossypium raimondii Gorai.008G170500 I 0.910
Gorai.013G029900 Gossypium raimondii Gorai.013G029900 I 0.949
Lus10003680.g Linum usitatissimum Lus10003680.g N 0.718
Lus10013242.g Linum usitatissimum Lus10013242.g I 0.821
Lus10028998.g Linum usitatissimum Lus10028998.g N 0.731
Lus10030763.g Linum usitatissimum Lus10030763.g I 0.808
MDP0000290118 Malus domestica MDP0000290118 I 0.859
mgf026615m Mimulus guttatus mgf026615m N 0.718
orange1.1g027579m.g Citrus sinensis orange1.1g027579m.g N 0.885
PGSC0003DMG400029466 Solanum tuberosum PGSC0003DMG400029466 N 0.731
PK02661.1 Cannabis sativa PK02661.1 I 0.808
Pm005894 Prunus mume Pm005894 I 0.872
POPTR_0008s13660 Populus trichocarpa POPTR_0008s13660 I 0.846
POPTR_0010s11410 Populus trichocarpa POPTR_0010s11410 I 0.846
PRUPE_ppa011075mg Prunus persica PRUPE_ppa011075mg I 0.872
SapurV1A.0015s0650 Salix purpurea SapurV1A.0015s0650 I 0.846
SapurV1A.0055s0220 Salix purpurea SapurV1A.0055s0220 I 0.846
Solyc04g008090.2 Solanum lycopersicum Solyc04g008090.2 N 0.731
Thhalv10005480m.g Eutrema salsugineum Thhalv10005480m.g I 0.731
VIT_01s0011g06060 Vitis vinifera VIT_01s0011g06060 N 0.782